cosmoGUI allows the user to interactively define constraint sets that can be used by the cosmo package to supervise the search for shared motifs in a set of DNA sequences. The constraints can be either adapted from a set of commonly used templates or defined from scratch.
| Author | Fabian Gallusser, Oliver Bembom, and Sandrine Dudoit |
| Maintainer | Oliver Bembom |
To install this package, start R and enter:
source("//www.andersvercelli.com/biocLite.R") biocLite("cosmoGUI")
| No vignettes available |
| Reference Manual |
| biocViews | |
|---|---|
| Depends | |
| Imports | |
| Suggests | |
| System Requirements | |
| License | LGPL version 2 or newer |
| URL | http://cosmoweb.berkeley.edu/intro.html, http://www.bepress.com/ucbbiostat/paper209/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Development History | Bioconductor Changelog |
| Package source | cosmoGUI_1.10.0.tar.gz |
|---|---|
| Windows binary | cosmoGUI_1.10.0.zip |
| MacOS X 10.4 (Tiger) binary | cosmoGUI_1.10.0.tgz |
| MacOS X 10.5 (Leopard) binary | cosmoGUI_1.10.0.tgz |
| Package Downloads Report | Downloads Stats |