# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量1:选择# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #选项(宽度= 60)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量2:loadSnpCallSet # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(SNPchip)数据(crlmmOut)类(crlmmOut) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量3:assayData # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #注释(crlmmOut) ls (assayData (crlmmOut)) callset <——crlmmOut # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量4:eval = FALSE # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(“益生元”)# #库(hapmap100kxba) # # pathCelFiles < -系统。文件(“celFiles”,包=“hapmap100kxba”) # # fullFilenames < -列表。celfiles (path = pathCelFiles full.names = TRUE) # # aboutSamples < - data.frame(性别= c(“女性”、“女性”、“男性”))# # rownames (aboutSamples) < - basename (fullFilenames) # # aboutVars < data.frame (labelDescription =“男/女”)# # rownames (aboutVars) < -“性别”# # pd < -新(“AnnotatedDataFrame”, # #数据= aboutSamples, # # varMetadata = aboutVars) # # xba < - justCRLMM (fullFilenames phenoData = pd, verbose = FALSE) # # # #库(hapmap100khind) # # pathCelFiles < -系统。文件(“celFiles”,包=“hapmap100khind”) # # fullFilenames < -列表。celfiles (path = pathCelFiles full.names = TRUE) # # aboutSamples < - data.frame(性别= c(“女性”、“女性”、“男性”))# # rownames (aboutSamples) < - basename (fullFilenames) # # aboutVars < data.frame (labelDescription =“男/女”)# # rownames (aboutVars) < -“性别”# # pd < -新(“AnnotatedDataFrame”, # #数据= aboutSamples, # # varMetadata = aboutVars) # #后<——justCRLMM (fullFilenames phenoData = pd, verbose = FALSE) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量5:eval = FALSE # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # callset <——结合(xba后)# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #块数量6:sessionInfo # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # toLatex (sessionInfo ())