## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("affy")

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, seeaffy.

Methods for Affymetrix Oligonucleotide Arrays

Bioconductor version: 2.8

The package contains functions for exploratory oligonucleotide array analysis. The dependence on tkWidgets only concerns few convenience functions. 'affy' is fully functional without it.

Author: Rafael A. Irizarry , Laurent Gautier , Benjamin Milo Bolstad , and Crispin Miller with contributions from Magnus Astrand , Leslie M. Cope , Robert Gentleman, Jeff Gentry, Conrad Halling , Wolfgang Huber, James MacDonald , Benjamin I. P. Rubinstein, Christopher Workman , John Zhang

Maintainer: Rafael A. Irizarry

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("affy")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affy")

PDF		affy.pdf
PDF		builtinMethods.pdf
PDF		customMethods.pdf
PDF		vim.pdf
PDF		Reference Manual

Details

biocViews	Microarray,OneChannel,Preprocessing,Software
Version	1.30.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 11 years)
License	LGPL (>= 2.0)
Depends	R (>= 2.8.0),Biobase(>= 2.5.5)
Imports	affyio(>= 1.13.3),Biobase(>= 2.5.5), graphics, grDevices, methods,preprocessCore, stats, utils
LinkingTo	preprocessCore
Suggests	tkWidgets(>= 1.19.0),affydata
SystemRequirements
Enhances
URL
Depends On Me	affyContam,affycoretools,affydata,AffyExpress,affylmGUI,affyPara,affypdnn,affyPLM,affyQCReport,AgiMicroRna,ALLMLL,altcdfenvs,AmpAffyExample,arrayMvout,ArrayTools,bgx,bronchialIL13,ccTutorial,CLL,dualKS,ecoliLeucine,estrogen,ExiMiR,farms,frmaTools,gcrma,LMGene,logitT,LVSmiRNA,maDB,MAQCsubset,MAQCsubsetAFX,MLP,mvoutData,panp,plw,puma,pumadata,qpcrNorm,RefPlus,rHVDM,RPA,simpleaffy,SpikeIn,SpikeInSubset,sscore,Starr,webbioc,XhybCasneuf
Imports Me	affyILM,affyQCReport,AffyTiling,ArrayExpress,arrayQualityMetrics,ArrayTools,farms,frma,gcrma,GEOsubmission,Harshlight,HTqPCR,lumi,makecdfenv,plier,plw,puma,pvac,simpleaffy,tilingArray,TurboNorm,vsn
Suggests Me	AnnotationDbi,beadarray,beadarraySNP,BiocCaseStudies,Biostrings,BufferedMatrixMethods,estrogen,ExpressionView,factDesign,GeneRegionScan,hexbin,limma,made4,oneChannelGUI,siggenes,TurboNorm
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Package Source	affy_1.30.0.tar.gz
Windows Binary	affy_1.30.0.zip(32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/affy/tree/release-2.8
Package Short Url	//www.andersvercelli.com/packages/affy/
Package Downloads Report	Download Stats