| biocViews |
Infrastructure,Software |
| Version |
2.26.0 |
| In Bioconductor since |
BioC 1.6 (R-2.1) or earlier (> 11 years) |
| License |
Artistic-2.0 |
| Depends |
R (>= 2.10),BiocGenerics(>= 0.3.2), utils |
| Imports |
methods |
| LinkingTo |
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| Suggests |
tools,tkWidgets,ALL,RUnit,golubEsets |
| SystemRequirements |
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| Enhances |
|
| URL |
|
| Depends On Me |
a4Base,a4Core,ACME,affy,affycomp,affycompData,affyContam,affycoretools,affyPLM,affyQCReport,AGDEX,AgiMicroRna,ALL,altcdfenvs,annaffy,AnnotationDbi,AnnotationForge,antiProfilesData,ArrayExpress,arrayMvout,ArrayTools,BAGS,bcellViper,beadarray,beadarrayExampleData,beadarraySNP,bgx,BicARE,BiocCaseStudies,bioDist,BioMVCClass,BioNet,birta,bladderbatch,BrainStars,CAMERA,cancerclass,cancerdata,casper,Category,categoryCompare,CCl4,cellHTS,cellHTS2,ceu1kg,ceuhm3,CGHbase,CGHcall,CGHregions,charm,cheung2010,chimera,chroGPS,ClassifyR,clippda,CLL,clusterStab,CMA,cn.farms,cn.mops,codelink,colonCA,convert,copa,CopyNumber450k,CRCL18,davidTiling,ddCt,DESeq,DEXSeq,DFP,DLBCL,dressCheck,dsQTL,DSS,dualKS,dyebias,EBarrays,EDASeq,eisa,encoDnaseI,EnrichmentBrowser,epigenomix,epivizr,ExiMiR,fabia,fabiaData,factDesign,fastseg,fibroEset,flowBeads,flowClust,frma,gaga,gaschYHS,GeneAnswers,GeneExpressionSignature,GeneMeta,geneplotter,geneRecommender,GeneRegionScan,GeneSelectMMD,GeneSelector,geNetClassifier,genoset,GEOquery,GGdata,GOexpress,GOFunction,golubEsets,goProfiles,GOstats,GSEABase,GSEAlm,GSVAdata,GWASTools,hapFabia,harbChIP,HCsnip,HELP,Hiiragi2013,hmyriB36,hopach,HTqPCR,htSeqTools,HTSFilter,humanStemCell,HybridMTest,iBMQ,IdeoViz,idiogram,inSilicoDb,inSilicoMerging,isobar,iterativeBMA,Iyer517,kidpack,leeBamViews,leukemiasEset,LMGene,lumi,lumiBarnes,lungExpression,macat,MAQCsubset,MAQCsubsetAFX,MAQCsubsetILM,maSigPro,massiR,MergeMaid,metabomxtr,metagenomeSeq,methyAnalysis,methylumi,Mfuzz,MiChip,MIMOSA,MineICA,minfi,MiRaGE,miRNATarget,MLInterfaces,MLSeq,MmPalateMiRNA,monocle,msd16s,MSnbase,Mulcom,multtest,mvoutData,Neve2006,NOISeq,nondetects,NormqPCR,nucleR,oligo,oneChannelGUI,OrderedList,OTUbase,OutlierD,PADOG,PAnnBuilder,panp,pcaMethods,pcot2,pdInfoBuilder,pdmclass,pepStat,PGSEA,phenoTest,PLPE,plrs,prada,PREDA,PREDAsampledata,ProData,PROMISE,prot2D,puma,pumadata,qpcrNorm,R453Plus1Toolbox,RbcBook1,rbsurv,ReadqPCR,reb,RefPlus,rHVDM,Ringo,Risa,Rmagpie,rMAT,RNAinteract,rnaSeqMap,Rnits,Roleswitch,RpsiXML,rqubic,RTCA,RTopper,RUVnormalizeData,safe,SCAN.UPC,SeqGSEA,sigaR,SigCheck,siggenes,simpleaffy,simulatorZ,SpeCond,SPEM,SpikeInSubset,spkTools,splicegear,spliceSites,stepwiseCM,TCGAcrcmiRNA,TCGAcrcmRNA,TDARACNE,tigre,tilingArray,topGO,tspair,tweeDEseqCountData,twilight,UNDO,VegaMC,viper,vsn,waveTiling,webbioc,xcms,XDE,yeastCC |
| Imports Me |
ABarray,aCGH,adSplit,affyILM,affyQCReport,AgiMicroRna,annmap,annotate,AnnotationDbi,AnnotationForge,annotationTools,ArrayExpressHTS,arrayQualityMetrics,ArrayTools,asmn,attract,ballgown,betr,bigmemoryExtras,biocViews,BioSeqClass,biosvd,BiSeq,blima,BrainStars,bsseq,CAFE,Category,ccTutorial,ceu1kgv,cgdv17,CGHnormaliter,charm,ChIPQC,ChIPXpress,ChromHeatMap,clipper,ConsensusClusterPlus,crlmm,cummeRbund,cycle,DESeq2,DeSousa2013,DOQTL,easyRNASeq,EBarrays,ecolitk,ExiMiR,farms,ffpe,Fletcher2013a,flowCore,flowFlowJo,flowFP,flowMatch,flowMeans,flowQB,flowStats,flowType,flowUtils,flowViz,flowWorkspace,flowWorkspace,FourCSeq,frma,frmaTools,gCMAP,gCMAPWeb,gcrma,genefilter,GeneMeta,geneRecommender,GeneRegionScan,GeneSelectMMD,GenomicFeatures,GenomicTuples,GEOsubmission,GGBase,ggbio,GGtools,girafe,globaltest,gmapR,GOFunction,GOstats,GSRI,GSVA,Gviz,Harshlight,HEM,HTqPCR,IdMappingAnalysis,imageHTS,IsoGeneGUI,KEGGandMetacoreDzPathwaysGEO,KEGGdzPathwaysGEO,lapmix,LiquidAssociation,lumi,LVSmiRNA,maanova,MafDb.ALL.wgs.phase1.release.v3.20101123,MafDb.ALL.wgs.phase1.release.v3.20101123,MafDb.ESP6500SI.V2.SSA137.dbSNP138,MafDb.ESP6500SI.V2.SSA137.dbSNP138,makecdfenv,maSigPro,mBPCR,MCRestimate,MeSHDbi,metaArray,methyAnalysis,methylumi,MiChip,MinimumDistance,MiPP,MMDiff,mmnet,MmPalateMiRNA,MoPS,MSnID,multiscan,mzR,ncdfFlow,npGSEA,nucleR,oligoClasses,openCyto,oposSOM,OrderedList,PADOG,PAnnBuilder,panp,Pbase,pcaGoPromoter,PCpheno,piano,plateCore,plgem,plier,ppiStats,prada,PROMISE,PSEA,puma,pvac,pvca,qcmetrics,QDNAseq,qpgraph,QUALIFIER,quantro,QuasR,qusage,randPack,ReadqPCR,ReportingTools,RforProteomics,RGalaxy,Rmagpie,rMAT,rols,Rtreemix,RUVnormalize,SAGx,ShortRead,SimBindProfiles,simpleaffy,SLGI,SNPchip,SomaticSignatures,spade,spkTools,splicegear,STATegRa,synapter,TEQC,timecourse,topGO,TSSi,twilight,VanillaICE,VariantAnnotation,VariantFiltering,XDE,yri1kgv |
| Suggests Me |
betr,BiocCaseStudies,BiocCheck,BiocGenerics,biocViews,breastCancerMAINZ,breastCancerNKI,breastCancerTRANSBIG,breastCancerUNT,breastCancerUPP,breastCancerVDX,BSgenome,Category,ccTutorial,curatedCRCData,DART,dyebiasexamples,estrogen,farms,genefu,GlobalAncova,globaltest,GSAR,Heatplus,interactiveDisplay,kebabs,les,limma,mammaPrintData,messina,nem,OSAT,pkgDepTools,rheumaticConditionWOLLBOLD,ROC,seventyGeneData,survcomp,TargetScore,tkWidgets,TypeInfo,vbmp,widgetTools,yeastExpData,yeastRNASeq |
| Build Report |
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