# # # R代码从装饰图案来源的查询。Rnw“# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块1号:数据# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(“注释”)的数据(sample.ExpressionSet) affys <——featureNames (sample.ExpressionSet) [490:500] affys # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块2号:注释# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #库(hgu95av2.db) id < - getPMID (affys, hgu95av2) id < - unlist ids (id、use.names = FALSE) < - - - - - -独特(ids [! is.na (as.numeric (ids))))长度(ids) id[1:10] # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块3号:getabsts # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # x < - pubmed (ids [1:10]) <——xmlRoot (x) numAbst <——长度(xmlChildren (a)) numAbst # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块4号:查询。Rnw: 170 - 179 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #艺术< -向量(“列表”,长度= numAbst) abst < -代表(NA, numAbst)(我在1:numAbst){# #为这个抽象艺术生成PubMedAbst对象[[我]]< - buildPubMedAbst([[我]])# #检索文摘文本摘要abst[我]<——abstText艺术(艺术[[我]])}[[7]]# # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块5号:查询。Rnw: 203 - 206 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #发现< - grep(“互补”,abst) goodAbsts <——艺术(发现)长度(goodAbsts) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块6号:查询。Rnw: 222 - 224 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # y < -基因库(ids[1:10],类型=“uid”) b <——xmlRoot (y) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块7号:abst2HTML # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #帧< - tempfile () pmAbst2HTML (goodAbsts文件名=帧)fnameBase <——tempfile () pmAbst2HTML (goodAbsts,文件名= fnameBase帧= TRUE) # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # #代码块8号:查询。Rnw: 267 - 268 # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # # sessionInfo ()