immunoClust

DOI:10.18129/B9.bioc.immunoClust

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, seeimmunoClust.

immunoClust - Automated Pipeline for Population Detection in Flow Cytometry

Bioconductor version: 3.11

immunoClust is a model based clustering approach for Flow Cytometry samples. The cell-events of single Flow Cytometry samples are modelled by a mixture of multinominal normal- or t-distributions. The cell-event clusters of several samples are modelled by a mixture of multinominal normal-distributions aiming stable co-clusters across these samples.

Author: Till Soerensen

Maintainer: Till Soerensen

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("immunoClust")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("immunoClust")

PDF	R Script	immunoClust package
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBasedAssays,Clustering,FlowCytometry,ImmunoOncology,SingleCell,Software
Version	1.20.1
In Bioconductor since	BioC 3.1 (R-3.2) (5.5 years)
License	Artistic-2.0
Depends	R (>= 3.6), methods, stats, graphics, grid,lattice, grDevices,flowCore
Imports
LinkingTo
Suggests	BiocStyle, utils
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	immunoClust_1.20.1.tar.gz
Windows Binary	immunoClust_1.20.1.zip(32- & 64-bit)
macOS 10.13 (High Sierra)	immunoClust_1.20.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/immunoClust
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/immunoClust
Package Short Url	//www.andersvercelli.com/packages/immunoClust/
Package Downloads Report	Download Stats