PasillaTranscriptExpr

DOI:10.18129/B9.bioc.PasillaTranscriptExpr

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, seePasillaTranscriptExpr.

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

Bioconductor version: 3.11

Provides kallisto workflow and transcript expression of RNA-Seq data from Brooks et al.

Author: Malgorzata Nowicka [aut, cre]

Maintainer: Malgorzata Nowicka

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("PasillaTranscriptExpr")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("PasillaTranscriptExpr")

PDF	R Script	Generation of transcript counts from pasilla dataset with kallisto
PDF		Reference Manual
Text		NEWS

Details

biocViews	Drosophila_melanogaster_Data,ExperimentData,ExpressionData,GEO,Genome,RNASeqData,SequencingData
Version	1.16.0
License	GPL (>= 3)
Depends	R (>= 3.3.0)
Imports
LinkingTo
Suggests	rtracklayer,BiocStyle,knitr,testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	DRIMSeq
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	PasillaTranscriptExpr_1.16.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/PasillaTranscriptExpr
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/PasillaTranscriptExpr
Package Short Url	//www.andersvercelli.com/packages/PasillaTranscriptExpr/
Package Downloads Report	Download Stats