chipseqDBData

DOI:10.18129/B9.bioc.chipseqDBData

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, seechipseqDBData.

Data for the chipseqDB Workflow

Bioconductor version: 3.11

Sorted and indexed BAM files for ChIP-seq libraries, for use in the chipseqDB workflow. BAM indices are also included.

Author: Aaron Lun [aut, cre]

Maintainer: Aaron Lun

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("chipseqDBData")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("chipseqDBData")

HTML	R Script	File manifest and statistics
PDF		Reference Manual

Details

biocViews	ChIPSeqData,ExperimentData,ExperimentHub,SequencingData
Version	1.4.0
License	CC BY 4.0
Depends
Imports	AnnotationHub,ExperimentHub,S4Vectors
LinkingTo
Suggests	knitr,BiocStyle,Rsamtools
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	chipseqDB,csawUsersGuide
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	chipseqDBData_1.4.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/chipseqDBData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/chipseqDBData
Package Short Url	//www.andersvercelli.com/packages/chipseqDBData/
Package Downloads Report	Download Stats