0.1.0(01-09-2017) +代码已经过测试,稳定。一旦小插图(和各种其他要求)完成,准备提交给Bioconductor。0.2.0 (01-18-2017) + Vignette完成测试0.99.0(01-20-2017)+包(版本0.99.0)提交Bioconductor审核0.99.2(02-24-2017)+修订包(版本0.99.2)提交Bioconductor进一步审核0.99.2(04-18-2017)+修订包(版本0.99.2)提交Bioconductor审核1.0.0 (04-19-2017)+ Bioconductor接受的包(版本1.0.0),包括在版本3.5中。1.2.0(09-26-2017) +增加了对ESTs/ cdna分析的支持;BED文件现在可以作为输入(版本1.2.0)1.2.1(2017-10-17)+文档的微小更改,以更好地反映v. 1.2(版本1.2.1)的更新。1.8.0(07-10-2018) +额外的启动子(TSR)指标添加到输出,包括修改的形状指数(mSI)和扭矩。+修改列id,以反映更新的命名法。+更新用户指南,除了创建跨平台可重复分析的奇点配方。1.8.9(10-08-2018) +修正了在分析与多个支架组件对齐的数据时遇到的速度问题的更新。+一个小插图的简化部分。 1.10.12 (09-17-2019) + Updates to include 3'-read capturing from bam input files and data structures to allow ignoring spurious TSSs. + Added capabilities for sorting by strand (and seq/TSS) for TSS merging. + Made a change leading to a substantial speed-up of mergeSampleData(). + Added qname to saved columns from .bam input. + Minor changes to writeTSR() and writeTSS(). + Rewrite to mergeSampleData). + Improvements to loadTSSobj(). + Necessary updates to the Singularity recipe to reflect the above changes. 1.13.1 (10-31-2019) + Version bump due to release of Bioconductor v. 3.10. 1.13.2 (11-01-2019) + Corrected minor bugs in non-user-level functions detTSR() and detTSS() + Various updates to Show-methods.R 1.13.3 (11-21-2019) + Updated documentation for loadTSSobj() for the sake of clarity. 1.13.4 (12-16-2019) + Added feature to writeTSS() that generates two separate bedgraph files (plus and minus) instead of one. 1.13.5 (3-30-2020) + Corrected line in loadTSSobj() that caused a build error in the Bioc devel branch (3.11).