| biocViews |
对齐,报道,DataImport,质量控制,测序,软件 |
| 版本 |
2.8.0 |
| Bioconductor自 |
BioC 2.6 (r - 2.11)(11.5年) |
| 许可证 |
艺术- 2.0 |文件许可证 |
| 取决于 |
方法,GenomeInfoDb(> = 1.1.3),GenomicRanges(> = 1.31.8),Biostrings(> = 2.47.6)、R (> = 3.5.0) |
| 进口 |
跑龙套,BiocGenerics(> = 0.25.1),S4Vectors(> = 0.17.25),IRanges(> = 2.13.12),XVector(> = 0.19.7),zlibbioc,bitops,BiocParallel,统计数据 |
| 链接 |
Rhtslib(> = 1.17.7),S4Vectors,IRanges,XVector,Biostrings |
| 建议 |
GenomicAlignments,ShortRead(> = 1.19.10),GenomicFeatures,TxDb.Dmelanogaster.UCSC.dm3.ensGene,TxDb.Hsapiens.UCSC.hg18.knownGene,RNAseqData.HNRNPC.bam.chr14,BSgenome.Hsapiens.UCSC.hg19,RUnit,BiocStyle |
| SystemRequirements |
GNU使 |
| 增强了 |
|
| URL |
//www.andersvercelli.com/packages/Rsamtools |
| BugReports |
https://github.com/Bioconductor/Rsamtools/issues |
| 取决于我 |
ArrayExpressHTS,BaalChIP,BitSeq,食典委,contiBAIT,CoverageView,esATAC,exomeCopy,弗雷泽,GenomicAlignments,GenomicFiles,girafe,gmapR,HelloRanges,感兴趣,leeBamViews,MEDIPS,methylPipe,MMDiff2,podkat,r3Cseq,Rcade,RepViz,ReQON,rfPred,RiboDiPA,rnaSeqMap,范围,测序,SGSeq,ShortRead,SICtools,SNPhood,ssviz,systemPipeR,TarSeqQC,TBX20BamSubset,TEQC,VariantAnnotation,wavClusteR |
| 进口我 |
AllelicImbalance,高山,AneuFinder,annmap,AnnotationHubData,APAlyzer,appreci8R,ArrayExpressHTS,ASpediaFI,ASpli,ATACseqQC,BadRegionFinder,bambu,BBCAnalyzer,biovizBase,biscuiteer,breakpointR,BRGenomics,BSgenome,篮球选手,卡斯珀,cellbaseR,CexoR,别致的,chimeraviz,ChIPComp,ChIPexoQual,ChIPpeakAnno,ChIPQC,chipseqDBData,ChIPSeqSpike,ChromSCape,chromstaR,chromVAR,cn.mops,CNVfilteR,CNVPanelizer,CNVrd2,compEpiTools,consensusDE,CopyNumberPlots,文案,CrispRVariants,csaw,CSSQ,customProDB,DAMEfinder,DegNorm,derfinder,DEXSeq,DiffBind,diffHic,easyRNASeq,EDASeq,ensembldb,epialleleR,epigenomix,epigraHMM,eudysbiome,exomePeak2,FilterFFPE,FunChIP,gcapc,GeneGeneInteR,GenoGAM,genomation,GenomicAlignments,GenomicInteractions,GenVisR,ggbio,gmoviz,哥特,GreyListChIP,GUIDEseq,Gviz,h5vc,HTSeqGenie,icetea,ima,检查,karyoploteR,ldblock,LungCancerLines,MACPET,MADSEQ,联合化疗,metagene,metagene2,metaseqR2,methylKit,MMAPPR2,MMAPPR2data,马赛克,motifmatchr,msgbsR,NADfinder,NanoMethViz,nearBynding,诊断,ORFik,panelcn.mops,图片,plyranges,婴儿车,profileplyr,PureCN,QDNAseq,qsea,QuasR,R453Plus1Toolbox,ramwas,收回,Repitools,RiboProfiling,riboSeqR,ribosomeProfilingQC,RNAmodR,RNAprobR,RNASeqR,Rqc,rtracklayer,颈背,segmentSeq,seqplots,seqsetvis,SimFFPE,sitadela,soGGi,SplicingGraphs,srnadiff,strandCheckR,systemPipeRdata,TCseq,TFutils,tracktables,trackViewer,transcriptR,tRNAscanImport,TSRchitect,TVTB,UMI4Cats,uncoverappLib,VariantFiltering,VariantTools,VaSP,VCFArray,VplotR |
| 建议我 |
AnnotationHub,bamsignals,BaseSpaceR,BiocGenerics,BiocParallel,biomvRCNS,芝加哥,chipseqDB,epivizrChart,计,GenomeInfoDb,GenomicDataCommons,GenomicFeatures,GenomicRanges,GeuvadisTranscriptExpr,gwascat,IRanges,NanoporeRNASeq,omicsPrint,parathyroidSE,RNAmodR.ML,SeqArray,seqbias,SigFuge,similaRpeak,拖缆 |
| 我的链接 |
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| 构建报告 |
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