BiocParallel

DOI:10.18129 / B9.bioc.BiocParallel

此包适用于Bioconductor 3.15版;有关稳定的最新发布版本,请参见BiocParallel

用于并行评估的生物导体设备

Bioconductor版本:3.15

此包提供了用于并行计算的修改版本和新颖函数实现,为与Bioconductor对象一起使用而定制。

作者:Martin Morgan [aut, cre],王杰飞[aut], Valerie Obenchain [aut], Michel Lang [aut], Ryan Thompson [aut], Nitesh Turaga [aut], Aaron Lun [ctb], Henrik Bengtsson [ctb]

维护者:Martin Morgan

引文(从R内,输入引用(“BiocParallel”)):

安装

要安装这个包,启动R(版本“4.2”)并输入:

如果(!require("BiocManager", quiet = TRUE)) install.packages("BiocManager")

对于R的旧版本,请参考相应的Bioconductor释放

文档

要查看系统中安装的此包版本的文档,请启动R并输入:

browseVignettes(“BiocParallel”)

PDF R脚本 1.BiocParallel简介
PDF R脚本 2.BatchtoolsParam简介
PDF R脚本 3.错误,日志和调试
PDF R脚本 4.BiocParallel中的随机数
PDF 参考手册
文本 新闻

细节

biocViews 基础设施软件
版本 1.30.4
在Bioconductor BioC 2.13 (R-3.0)(9年)
许可证 Gpl-2 | gpl-3
取决于 方法,R (>= 3.5.0)
进口 属性,跑龙套,futile.logger平行,codetools
链接 黑洞
建议 BiocGenerics、工具、foreachBatchJobsBBmiscdoParallelRmpiGenomicRangesRNAseqData.HNRNPC.bam.chr14TxDb.Hsapiens.UCSC.hg19.knownGeneVariantAnnotationRsamtoolsGenomicAlignmentsShortReadRUnitBiocStyleknitrbatchtoolsdata.table
SystemRequirements c++ 11
增强了
URL https://github.com/Bioconductor/BiocParallel
BugReports https://github.com/Bioconductor/BiocParallel/issues
全靠我 培根BEclear红衣主教ChIPQCClassifyRclusterSeqconsensusSeekeR文案德科DEWSeqDEXSeqDMCFBDMCHMMdoppelgangRDSSextraChIPs盛宴弗雷泽GenomicFileshiReadsProcessor检查iPath工商管理硕士metagenemetagene2metaponencGTWOscope先驱者PCANperiodicDNApRolocRqc测序ShortReadSigCheck光谱STROMA4SummarizedBenchmark股东价值分析variancePartitionxcms
进口我 abseqRADImputeAffiXcanALDEx2AlphaBetaAlpsNMRamplican亚瑟士ASpediaFIatenaatSNPbambu强盗bandle基础知识后面;bayNorm啤酒benchdamicBiocNeighborsBioCorBiocSingularBioMMBioNEROBioNetStatbiotmlebiscuiteer咆哮brendaDbbsseqCAGEfightR篮球选手CBEAcellbaseRCellBenchCelliDCellMixScenscytCepoChIPexoQualChromSCapechromswitchchromVARCNVMetricsCNVRangerCoGAPScomaprcoMethDMR调味品consensusDEcontiBAITCoreGxcoseqcpvSNPCrispRVariantscsawcydarCytoGLMMcytoKernelcytomapperdasperdcGSAdebCAMDEComplexDiseaseDepInfeRderfinderDEScan2DESeq2DEsingleDiffBind恐龙dmrseq剂量DRIMSeqDropletUtils沙丘更容易easyRNASeqEMDomicsenhancerHomologSearchepimutacionsermaERSSA逃避EWCEexomePeak2ExpHunterSuitefgseaFindIT2flowcatchRflowSpecsGDCRNATools《创世纪》GenoGAMGenomicAlignmentsgenotypeevalgmapRGRaNIEgscreendGSEABenchmarkeRGSVAGUIDEseqh5vcHiCBricksHiCcompareHTSeqGenieHTSFilteriasvaicetea理想的IHWpaperimaimcRtools感兴趣电离首次公开募股ISAnalyticsivaKinSwingRLineagePulselisaClustloci2pathLowMACALRcellMacarronMACPETmbkmeansMCbiclustMetaboAnnotationmetabomxtrmetaseqR2MethCPMethylAidmethylGSAmethylInheritancemethylscaperMetNet米娅miaVizmicrobiomeMarkerMIGSAmiloRminfimixOmicsMMAPPR2MOGAMUN蒙娜丽莎motifbreakRMPRAnalyzeMsBackendMassbankMsBackendMgfMsBackendMspMsBackendRawFileReaderMSnbasemsqrob2MSstatsSampleSizemultiHiCcomparemumosa马斯喀特NBAMSeqNBSplicennSVGNPARCNxtIRFcoreOmicsLonDAORFikOVESEGPAIRADISEPCAtoolsPDATKpenglsPharmacoGxpipeComp婴儿车PrecisionTrialDrawer高伦雅芙proFIAprofileplyrProteoDiscoPSMatchqpgraphqseaQuasRRadioGxRcwl重新计票RegEnrichREMPRiboCryptRJMCMCNucleosomesRNAmodRRsamtoolsRUVcorr土星scanMiRscanMiRAppscClassifyscDblFinderscDDscde短链脂肪酸散粒scMergeSCnorm司康饼scoreInvHapscPCA食物scRecover颈背scShapesscTHI天窗seqArchR芝麻SEtoolssigFeaturesignatureSearchsingleCellTKsingscoreSNPhoodsoGGi麻雀spatialHeatmapSpectralTADspicyR飞溅SplicingGraphssrnadiffsSNAPPYSTdeconvolveTAPseqTarSeqQCTBSignatureProfilerternarynetTFBSToolsTMixClustToxicoGxTPP2DtradeSeqTraReTreeSummarizedExperiment时尚的TSRchitectTVTBtxcutrUCellVariantFilteringVariantTools伶盗龙waddRweitrixzinbwave
建议我 beachmatCAGEWorkflowDelayedArrayDIAlignREpiCompareGenomicDataCommonsglmGamPoiHDF5ArrayMethylAidDatanetSmoothomicsPrintPureCNrandRotationRcisTarget锐步scGPSSeqArraySingle.mTEC.TranscriptomesTENxBrainDataTENxPBMCDataTFutilsTileDBArraytofsimsTrajectoryUtilstrenaTSCANuniversalmotifxcore
链接到我
构建报告

包档案

遵循2021年欧洲杯比分预测 在R会话中使用此包的说明。

源包 BiocParallel_1.30.4.tar.gz
Windows二进制 BiocParallel_1.30.4.zip(64位)
macOS二进制文件(x86_64) BiocParallel_1.30.4.tgz
源库 git克隆https://git.bioconductor.org/packages/BiocParallel
源存储库(开发人员访问) git克隆git@git.bioconductor.org:packages/BiocParallel
包短Url //www.andersvercelli.com/packages/BiocParallel/
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