## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("VariantTools")

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, seeVariantTools.

Tools for Working with Genetic Variants

Bioconductor version: 3.2

Tools for detecting, filtering, calling, comparing and plotting variants.

Author: Michael Lawrence, Jeremiah Degenhardt, Robert Gentleman

Maintainer: Michael Lawrence

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("VariantTools")

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("VariantTools")

PDF		Introduction to VariantTools
PDF		Reference Manual
Text		NEWS

Details

biocViews	GeneticVariability,Genetics,Sequencing,Software
Version	1.12.0
In Bioconductor since	BioC 2.11 (R-2.15) (3.5 years)
License	Artistic-2.0
Depends	S4Vectors(>= 0.0.2),IRanges(>= 1.99.2),GenomicRanges(>= 1.17.7),VariantAnnotation(>= 1.11.16), methods
Imports	Rsamtools(>= 1.17.6),BiocGenerics,Biostrings, parallel,gmapR(>= 1.7.2),GenomicFeatures(>= 1.17.13),Matrix,rtracklayer(>= 1.25.3),BiocParallel,GenomeInfoDb,BSgenome,Biobase
LinkingTo
Suggests	RUnit,LungCancerLines(>= 0.0.6),RBGL,graph
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	HTSeqGenie
Suggests Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Package Source	VariantTools_1.12.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/VariantTools/tree/release-3.2
Package Short Url	//www.andersvercelli.com/packages/VariantTools/
Package Downloads Report	Download Stats