| biocViews |
注释,GenomeAnnotation,微阵列,测序,软件 |
| 版本 |
1.36.2 |
| 在Bioconductor中 |
BioC 2.1 (R-2.6)(9.5年) |
| 许可证 |
艺术- 2.0 |
| 取决于 |
R (>= 2.7.0)， methods, utils, stats4，BiocGenerics(> = 0.15.10),Biobase(> = 1.17.0),IRanges |
| 进口 |
方法,跑龙套,DBI,RSQLitestats4,BiocGenerics,Biobase,S4Vectors(> = 0.9.25),IRanges |
| 链接 |
|
| 建议 |
DBI(> = 0.2 4),RSQLite(> = 0.6 4),hgu95av2.db,GO.db,org.Sc.sgd.db,org.At.tair.db,KEGG.db,RUnit,TxDb.Hsapiens.UCSC.hg19.knownGene,hom.Hs.inp.db,org.Hs.eg.db,reactome.db,AnnotationForge,图,EnsDb.Hsapiens.v75,BiocStyle,knitr |
| SystemRequirements |
|
| 增强了 |
|
| URL |
|
| 这取决于我 |
a4Base,a4Preproc,adme16cod.db,ag.db,agprobe,注释,AnnotationForge,AnnotationFuncs,anopheles.db0,arabidopsis.db0,ASpli,ath1121501.db,ath1121501probe,吸引,barley1probe,bovine.db,bovine.db0,bovineprobe,bsubtilisprobe,canine.db,canine.db0,canine2.db,canine2probe,canineprobe,类别,celegans.db,celegansprobe,chicken.db,chicken.db0,chickenprobe,嵌合体,chimp.db0,ChromHeatMap,citrusprobe,clariomdhumanprobeset.db,clariomdhumantranscriptcluster.db,clariomshumanhttranscriptcluster.db,clariomshumantranscriptcluster.db,clariomsmousehttranscriptcluster.db,clariomsmousetranscriptcluster.db,clariomsrathttranscriptcluster.db,clariomsrattranscriptcluster.db,cottonprobe,customProDB,DEXSeq,DO.db,drosgenome1.db,drosgenome1probe,drosophila2.db,drosophila2probe,ecoli2.db,ecoli2probe,ecoliasv2probe,ecoliK12.db0,ecoliprobe,ecoliSakai.db0,EGSEA,eisa,ExpressionView,有限元法,fly.db0,gahgu133a.db,gahgu133aprobe,gahgu133b.db,gahgu133bprobe,gahgu133plus2.db,gahgu133plus2probe,gahgu95av2.db,gahgu95av2probe,gahgu95b.db,gahgu95bprobe,gahgu95c.db,gahgu95cprobe,gahgu95d.db,gahgu95dprobe,gahgu95e.db,gahgu95eprobe,GenomicFeatures,GGdata,GGHumanMethCancerPanelv1.db,GO.db,GOFunction,goProfiles,h10kcod.db,h20kcod.db,hcg110.db,hcg110probe,hgfocus.db,hgfocusprobe,hgu133a.db,hgu133a2.db,hgu133a2probe,hgu133aprobe,hgu133atagprobe,hgu133b.db,hgu133bprobe,hgu133plus2.db,hgu133plus2probe,hgu219.db,hgu219probe,hgu95a.db,hgu95aprobe,hgu95av2.db,hgu95av2probe,hgu95b.db,hgu95bprobe,hgu95c.db,hgu95cprobe,hgu95d.db,hgu95dprobe,hgu95e.db,hgu95eprobe,hguatlas13k.db,hgubeta7.db,hguDKFZ31.db,hgug4100a.db,hgug4101a.db,hgug4110b.db,hgug4111a.db,hgug4112a.db,hgug4845a.db,hguqiagenv3.db,hi16cod.db,hom.At.inp.db,hom.Ce.inp.db,hom.Dm.inp.db,hom.Dr.inp.db,hom.Hs.inp.db,hom.Mm.inp.db,hom.Rn.inp.db,hom.Sc.inp.db,Homo.sapiens,hs25kresogen.db,Hs6UG171.db,HsAgilentDesign026652.db,hta20probeset.db,hta20transcriptcluster.db,hthgu133a.db,hthgu133aprobe,hthgu133b.db,hthgu133bprobe,hthgu133pluspmprobe,htmg430aprobe,htmg430bprobe,htmg430pmprobe,htrat230pmprobe,htratfocusprobe,hu35ksuba.db,hu35ksubaprobe,hu35ksubb.db,hu35ksubbprobe,hu35ksubc.db,hu35ksubcprobe,hu35ksubd.db,hu35ksubdprobe,hu6800.db,hu6800probe,huex10stprobeset.db,huex10sttranscriptcluster.db,HuExExonProbesetLocation,HuExExonProbesetLocationHg18,HuExExonProbesetLocationHg19,hugene10stprobeset.db,hugene10sttranscriptcluster.db,hugene10stv1probe,hugene11stprobeset.db,hugene11sttranscriptcluster.db,hugene20stprobeset.db,hugene20sttranscriptcluster.db,hugene21stprobeset.db,hugene21sttranscriptcluster.db,human.db0,HuO22.db,hwgcod.db,IlluminaHumanMethylation27k.db,IlluminaHumanMethylation450k.db,IlluminaHumanMethylation450kprobe,illuminaHumanv1.db,illuminaHumanv2.db,illuminaHumanv2BeadID.db,illuminaHumanv3.db,illuminaHumanv4.db,illuminaHumanWGDASLv3.db,illuminaHumanWGDASLv4.db,illuminaMousev1.db,illuminaMousev1p1.db,illuminaMousev2.db,illuminaRatv1.db,indac.db,JazaeriMetaData.db,KEGG.db,LAPOINTE.db,lumiHumanAll.db,lumiHumanIDMapping,lumiMouseAll.db,lumiMouseIDMapping,lumiRatAll.db,lumiRatIDMapping,m10kcod.db,m20kcod.db,maizeprobe,malaria.db0,maPredictDSC,medicagoprobe,MGFM,mgu74a.db,mgu74aprobe,mgu74av2.db,mgu74av2probe,mgu74b.db,mgu74bprobe,mgu74bv2.db,mgu74bv2probe,mgu74c.db,mgu74cprobe,mgu74cv2.db,mgu74cv2probe,mguatlas5k.db,mgug4104a.db,mgug4120a.db,mgug4121a.db,mgug4122a.db,mi16cod.db,mirbase.db,mirna10probe,miRNAtap,中长期规划,mm24kresogen.db,MmAgilentDesign026655.db,moe430a.db,moe430aprobe,moe430b.db,moe430bprobe,moex10stprobeset.db,moex10sttranscriptcluster.db,MoExExonProbesetLocation,mogene10stprobeset.db,mogene10sttranscriptcluster.db,mogene10stv1probe,mogene11stprobeset.db,mogene11sttranscriptcluster.db,mogene20stprobeset.db,mogene20sttranscriptcluster.db,mogene21stprobeset.db,mogene21sttranscriptcluster.db,mouse.db0,mouse4302.db,mouse4302probe,mouse430a2.db,mouse430a2probe,mpedbarray.db,mta10probeset.db,mta10transcriptcluster.db,mu11ksuba.db,mu11ksubaprobe,mu11ksubb.db,mu11ksubbprobe,Mu15v1.db,mu19ksuba.db,mu19ksubb.db,mu19ksubc.db,Mu22v3.db,Mus.musculus,mwgcod.db,Norway981.db,nugohs1a520180.db,nugohs1a520180probe,nugomm1a520177.db,nugomm1a520177probe,OperonHumanV3.db,org.Ag.eg.db,org.At.tair.db,org.Bt.eg.db,org.Ce.eg.db,org.Cf.eg.db,org.Dm.eg.db,org.Dr.eg.db,org.EcK12.eg.db,org.EcSakai.eg.db,org.Gg.eg.db,org.Hs.eg.db,org.Hs.ipi.db,org.Mm.eg.db,org.Mmu.eg.db,org.Pf.plasmo.db,org.Pt.eg.db,org.Rn.eg.db,org.Sc.sgd.db,org.Sco.eg.db,org.Ss.eg.db,org.Tgondii.eg.db,org.Xl.eg.db,OrganismDbi,paeg1aprobe,PAnnBuilder,PANTHER.db,PartheenMetaData.db,pathRender,pedbarrayv10.db,pedbarrayv9.db,PFAM.db,PGSEA,pig.db0,plasmodiumanophelesprobe,POCRCannotation.db,poplarprobe,porcine.db,porcineprobe,primeviewprobe,proBAMr,r10kcod.db,rae230a.db,rae230aprobe,rae230b.db,rae230bprobe,raex10stprobeset.db,raex10sttranscriptcluster.db,RaExExonProbesetLocation,ragene10stprobeset.db,ragene10sttranscriptcluster.db,ragene10stv1probe,ragene11stprobeset.db,ragene11sttranscriptcluster.db,ragene20stprobeset.db,ragene20sttranscriptcluster.db,ragene21stprobeset.db,ragene21sttranscriptcluster.db,rat.db0,rat2302.db,rat2302probe,rattoxfxprobe,Rattus.norvegicus,reactome.db,rgu34a.db,rgu34aprobe,rgu34b.db,rgu34bprobe,rgu34c.db,rgu34cprobe,rguatlas4k.db,rgug4105a.db,rgug4130a.db,rgug4131a.db,rhesus.db0,rhesusprobe,ri16cod.db,riceprobe,RnAgilentDesign028282.db,rnu34.db,rnu34probe,Roberts2005Annotation.db,RpsiXML,rta10probeset.db,rta10transcriptcluster.db,rtu34.db,rtu34probe,rwgcod.db,安全,saureusprobe,SemDist,SHDZ.db,soybeanprobe,sugarcaneprobe,targetscan.Hs.eg.db,targetscan.Mm.eg.db,test3probe,tinesath1probe,tomatoprobe,topGO,u133x3p.db,u133x3pprobe,vitisviniferaprobe,wheatprobe,worm.db0,xenopus.db0,xenopuslaevisprobe,xlaevis.db,xlaevis2probe,xtropicalisprobe,yeast.db0,yeast2.db,yeast2probe,ygs98.db,ygs98probe,zebrafish.db,zebrafish.db0,zebrafishprobe |
| 进口我 |
adme16cod.db,adSplit,affycoretools,affylmGUI,ag.db,agcdf,AllelicImbalance,annaffy,AnnotationHub,AnnotationHubData,annotatr,anopheles.db0,arabidopsis.db0,ath1121501.db,ath1121501cdf,barley1cdf,beadarray,biomaRt,生命网络,biovizBase,bovine.db,bovine.db0,bovinecdf,bsubtiliscdf,bumphunter,CancerMutationAnalysis,canine.db,canine.db0,canine2.db,canine2cdf,caninecdf,categoryCompare,ccmap,celegans.db,celeganscdf,cellity,cheung2010,chicken.db,chicken.db0,chickencdf,chimp.db0,ChIPpeakAnno,ChIPseeker,citruscdf,clariomdhumanprobeset.db,clariomdhumantranscriptcluster.db,clariomshumanhttranscriptcluster.db,clariomshumantranscriptcluster.db,clariomsmousehttranscriptcluster.db,clariomsmousetranscriptcluster.db,clariomsrathttranscriptcluster.db,clariomsrattranscriptcluster.db,clusterProfiler,CoCiteStats,compEpiTools,cottoncdf,crisprseekplus,CrispRVariants,crossmeta,csaw,customProDB,cyp450cdf,debrowser,derfinder,DeSousa2013,DO.db,domainsignatures,剂量,drosgenome1.db,drosgenome1cdf,drosophila2.db,drosophila2cdf,dSimer,ecoli2.db,ecoli2cdf,ecoliasv2cdf,ecolicdf,ecoliK12.db0,ecoliSakai.db0,EDASeq,eegc,EnrichmentBrowser,ensembldb,erma,ExpressionView,FDb.FANTOM4.promoters.hg19,FDb.InfiniumMethylation.hg18,FDb.InfiniumMethylation.hg19,FDb.UCSC.snp135common.hg19,FDb.UCSC.snp137common.hg19,FDb.UCSC.tRNAs,fly.db0,计,gahgu133a.db,gahgu133b.db,gahgu133plus2.db,gahgu95av2.db,gahgu95b.db,gahgu95c.db,gahgu95d.db,gahgu95e.db,gCMAP,gCMAPWeb,genefilter,geneplotter,GenVisR,GGBase,ggbio,GGHumanMethCancerPanelv1.db,GGtools,GlobalAncova,globaltest,GO.db,GOFunction,还装有,GOSemSim,goseq,GOSim,GOstats,goTools,gp53cdf,gQTLstats,石墨,GSEABase,Gviz,gwascat,h10kcod.db,h20kcod.db,hcg110.db,hcg110cdf,hgfocus.db,hgfocuscdf,hgu133a.db,hgu133a2.db,hgu133a2cdf,hgu133acdf,hgu133atagcdf,hgu133b.db,hgu133bcdf,hgu133plus2.db,hgu133plus2cdf,hgu219.db,hgu219cdf,hgu95a.db,hgu95acdf,hgu95av2.db,hgu95av2cdf,hgu95b.db,hgu95bcdf,hgu95c.db,hgu95ccdf,hgu95d.db,hgu95dcdf,hgu95e.db,hgu95ecdf,hguatlas13k.db,hgubeta7.db,hguDKFZ31.db,hgug4100a.db,hgug4101a.db,hgug4110b.db,hgug4111a.db,hgug4112a.db,hgug4845a.db,hguqiagenv3.db,hi16cod.db,hivprtplus2cdf,hom.At.inp.db,hom.Ce.inp.db,hom.Dm.inp.db,hom.Dr.inp.db,hom.Hs.inp.db,hom.Mm.inp.db,hom.Rn.inp.db,hom.Sc.inp.db,Homo.sapiens,hs25kresogen.db,Hs6UG171.db,HsAgilentDesign026652.db,Hspec,hspeccdf,hta20probeset.db,hta20transcriptcluster.db,hthgu133a.db,hthgu133acdf,hthgu133b.db,hthgu133bcdf,hthgu133pluspmcdf,htmg430acdf,htmg430bcdf,htmg430pmcdf,htrat230pmcdf,htratfocuscdf,HTSanalyzeR,hu35ksuba.db,hu35ksubacdf,hu35ksubb.db,hu35ksubbcdf,hu35ksubc.db,hu35ksubccdf,hu35ksubd.db,hu35ksubdcdf,hu6800.db,hu6800cdf,hu6800subacdf,hu6800subbcdf,hu6800subccdf,hu6800subdcdf,huex10stprobeset.db,huex10sttranscriptcluster.db,hugene10stprobeset.db,hugene10sttranscriptcluster.db,hugene10stv1cdf,hugene11stprobeset.db,hugene11sttranscriptcluster.db,hugene20stprobeset.db,hugene20sttranscriptcluster.db,hugene21stprobeset.db,hugene21sttranscriptcluster.db,human.db0,HuO22.db,hwgcod.db,IlluminaHumanMethylation27k.db,IlluminaHumanMethylation450k.db,illuminaHumanv1.db,illuminaHumanv2.db,illuminaHumanv2BeadID.db,illuminaHumanv3.db,illuminaHumanv4.db,illuminaHumanWGDASLv3.db,illuminaHumanWGDASLv4.db,illuminaMousev1.db,illuminaMousev1p1.db,illuminaMousev2.db,illuminaRatv1.db,indac.db,InPAS,interactiveDisplay,iva,JazaeriMetaData.db,KEGG.db,KEGGlincs,keggorthology,KEGGprofile,LAPOINTE.db,limmaGUI,光民,lumiHumanAll.db,lumiHumanIDMapping,lumiMouseAll.db,lumiMouseIDMapping,lumiRatAll.db,lumiRatIDMapping,m10kcod.db,m20kcod.db,MafDb.ESP6500SI.V2.SSA137,maizecdf,malaria.db0,mAPKL,mdgsa,medicagocdf,MeSHDbi,网格,MetaboSignal,methyAnalysis,methylumi,mgu74a.db,mgu74acdf,mgu74av2.db,mgu74av2cdf,mgu74b.db,mgu74bcdf,mgu74bv2.db,mgu74bv2cdf,mgu74c.db,mgu74ccdf,mgu74cv2.db,mgu74cv2cdf,mguatlas5k.db,mgug4104a.db,mgug4120a.db,mgug4121a.db,mgug4122a.db,mi16cod.db,MineICA,海市蜃楼,mirbase.db,miRBaseVersions.db,mirIntegrator,mirna102xgaincdf,mirna10cdf,mirna20cdf,miRNAmeConverter,miRNAtap.db,missMethyl,mm24kresogen.db,MmAgilentDesign026655.db,moe430a.db,moe430acdf,moe430b.db,moe430bcdf,moex10stprobeset.db,moex10sttranscriptcluster.db,mogene10stprobeset.db,mogene10sttranscriptcluster.db,mogene10stv1cdf,mogene11stprobeset.db,mogene11sttranscriptcluster.db,mogene20stprobeset.db,mogene20sttranscriptcluster.db,mogene21stprobeset.db,mogene21sttranscriptcluster.db,mouse.db0,mouse4302.db,mouse4302cdf,mouse430a2.db,mouse430a2cdf,mpedbarray.db,mta10probeset.db,mta10transcriptcluster.db,mu11ksuba.db,mu11ksubacdf,mu11ksubb.db,mu11ksubbcdf,Mu15v1.db,mu19ksuba.db,mu19ksubacdf,mu19ksubb.db,mu19ksubbcdf,mu19ksubc.db,mu19ksubccdf,Mu22v3.db,mu6500subacdf,mu6500subbcdf,mu6500subccdf,mu6500subdcdf,Mus.musculus,mvGST,mwgcod.db,NanoStringQCPro,Norway981.db,nugohs1a520180.db,nugohs1a520180cdf,nugomm1a520177.db,nugomm1a520177cdf,OperonHumanV3.db,org.Ag.eg.db,org.At.tair.db,org.Bt.eg.db,org.Ce.eg.db,org.Cf.eg.db,org.Dm.eg.db,org.Dr.eg.db,org.EcK12.eg.db,org.EcSakai.eg.db,org.Gg.eg.db,org.Hs.eg.db,org.Hs.ipi.db,org.Mm.eg.db,org.Mmu.eg.db,org.Pf.plasmo.db,org.Pt.eg.db,org.Rn.eg.db,org.Sc.sgd.db,org.Sco.eg.db,org.Ss.eg.db,org.Tgondii.eg.db,org.Xl.eg.db,PADOG,paeg1acdf,PAnnBuilder,PartheenMetaData.db,pathview,pcaExplorer,pcaGoPromoter,PCpheno,pedbarrayv10.db,pedbarrayv9.db,PFAM.db,PGA,phenoTest,pig.db0,plasmodiumanophelescdf,POCRCannotation.db,PolyPhen.Hsapiens.dbSNP131,poplarcdf,porcine.db,porcinecdf,ppiData,primeviewcdf,pwOmics,qpgraph,r10kcod.db,rae230a.db,rae230acdf,rae230b.db,rae230bcdf,raex10stprobeset.db,raex10sttranscriptcluster.db,ragene10stprobeset.db,ragene10sttranscriptcluster.db,ragene10stv1cdf,ragene11stprobeset.db,ragene11sttranscriptcluster.db,ragene20stprobeset.db,ragene20sttranscriptcluster.db,ragene21stprobeset.db,ragene21sttranscriptcluster.db,rat.db0,rat2302.db,rat2302cdf,rattoxfxcdf,Rattus.norvegicus,美国广播公司,rCGH,reactome.db,ReactomePA,REDseq,ReportingTools,rgsepd,rgu34a.db,rgu34acdf,rgu34b.db,rgu34bcdf,rgu34c.db,rgu34ccdf,rguatlas4k.db,rgug4105a.db,rgug4130a.db,rgug4131a.db,rhesus.db0,rhesuscdf,ri16cod.db,ricecdf,RmiR.Hs.miRNA,RmiR.hsa,RnAgilentDesign028282.db,rnu34.db,rnu34cdf,Roberts2005Annotation.db,rta10probeset.db,rta10transcriptcluster.db,rTRM,rtu34.db,rtu34cdf,rwgcod.db,saureuscdf,ScISI,SGSeq,SHDZ.db,SIFT.Hsapiens.dbSNP132,SIFT.Hsapiens.dbSNP137,SLGI,击杀,soybeancdf,SpidermiR,StarBioTrek,sugarcanecdf,SVM2CRM,targetscan.Hs.eg.db,targetscan.Mm.eg.db,test1cdf,test2cdf,test3cdf,tigre,tomatocdf,ToPASeq,trackViewer,TxDb.Athaliana.BioMart.plantsmart22,TxDb.Athaliana.BioMart.plantsmart25,TxDb.Athaliana.BioMart.plantsmart28,TxDb.Btaurus.UCSC.bosTau8.refGene,TxDb.Celegans.UCSC.ce11.refGene,TxDb.Celegans.UCSC.ce6.ensGene,TxDb.Cfamiliaris.UCSC.canFam3.refGene,TxDb.Dmelanogaster.UCSC.dm3.ensGene,TxDb.Dmelanogaster.UCSC.dm6.ensGene,TxDb.Drerio.UCSC.danRer10.refGene,TxDb.Ggallus.UCSC.galGal4.refGene,TxDb.Hsapiens.BioMart.igis,TxDb.Hsapiens.UCSC.hg18.knownGene,TxDb.Hsapiens.UCSC.hg19.knownGene,TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts,TxDb.Hsapiens.UCSC.hg38.knownGene,TxDb.Mmulatta.UCSC.rheMac3.refGene,TxDb.Mmulatta.UCSC.rheMac8.refGene,TxDb.Mmusculus.UCSC.mm10.ensGene,TxDb.Mmusculus.UCSC.mm10.knownGene,TxDb.Mmusculus.UCSC.mm9.knownGene,TxDb.Ptroglodytes.UCSC.panTro4.refGene,TxDb.Rnorvegicus.BioMart.igis,TxDb.Rnorvegicus.UCSC.rn4.ensGene,TxDb.Rnorvegicus.UCSC.rn5.refGene,TxDb.Rnorvegicus.UCSC.rn6.refGene,TxDb.Scerevisiae.UCSC.sacCer2.sgdGene,TxDb.Scerevisiae.UCSC.sacCer3.sgdGene,TxDb.Sscrofa.UCSC.susScr3.refGene,u133aaofav2cdf,u133x3p.db,u133x3pcdf,UniProt.ws,VariantAnnotation,VariantFiltering,vitisviniferacdf,wheatcdf,worm.db0,xenopus.db0,xenopuslaeviscdf,xlaevis.db,xlaevis2cdf,xtropicaliscdf,ye6100subacdf,ye6100subbcdf,ye6100subccdf,ye6100subdcdf,yeast.db0,yeast2.db,yeast2cdf,ygs98.db,ygs98cdf,zebrafish.db,zebrafish.db0,zebrafishcdf |
| 建议我 |
BiocCaseStudies,BiocGenerics,DEGreport,esetVis,FGNet,fgsea,gCrisprTools,geecc,GeneAnswers,GeneRegionScan,GenomicRanges,limma,miRLAB,MmPalateMiRNA,益生元,益生元,oneChannelGUI,钢琴,Pigengene,pRoloc,qcmetrics,R3CPET,重新计票,sigPathway,SummarizedExperiment |
| 构建报告 |
|
