## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("cn.farms")

DOI:10.18129/B9.bioc.cn.farms

cn.FARMS - factor analysis for copy number estimation

Bioconductor version: Release (3.5)

This package implements the cn.FARMS algorithm for copy number variation (CNV) analysis. cn.FARMS allows to analyze the most common Affymetrix (250K-SNP6.0) array types, supports high-performance computing using snow and ff.

Author: Andreas Mitterecker, Djork-Arne Clevert

Maintainer: Andreas Mitterecker

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("cn.farms")

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("cn.farms")

PDF	R Script	cn.farms: Manual for the R package
PDF		Reference Manual

Details

biocViews	CopyNumberVariation,Microarray,Software
Version	1.24.0
In Bioconductor since	BioC 2.8 (R-2.13) (6.5 years)
License	LGPL (>= 2.0)
Depends	R (>= 3.0),Biobase, methods,ff,oligoClasses,snow
Imports	DBI,affxparser,oligo,DNAcopy,preprocessCore,lattice
LinkingTo
Suggests	pd.mapping250k.sty,pd.mapping250k.nsp,pd.genomewidesnp.5,pd.genomewidesnp.6
SystemRequirements
Enhances
URL	http://www.bioinf.jku.at/software/cnfarms/cnfarms.html
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	cn.farms_1.24.0.tar.gz
Windows Binary	cn.farms_1.24.0.zip(32- & 64-bit)
Mac OS X 10.11 (El Capitan)	cn.farms_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/cn.farms
Package Short Url	//www.andersvercelli.com/packages/cn.farms/
Package Downloads Report	Download Stats