illuminaio

DOI:10.18129/B9.bioc.illuminaio

Parsing Illumina Microarray Output Files

Bioconductor version: Release (3.6)

Tools for parsing Illumina's microarray output files, including IDAT.

Author: Keith Baggerly [aut], Henrik Bengtsson [aut], Kasper Daniel Hansen [aut, cre], Matt Ritchie [aut], Mike L. Smith [aut], Tim Triche Jr. [ctb]

Maintainer: Kasper Daniel Hansen

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported source("//www.andersvercelli.com/biocLite.R") biocLite("illuminaio")

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("illuminaio")

PDF		Description of Encrypted IDAT Format
PDF	R Script	Introduction to illuminaio
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport,Infrastructure,Microarray,ProprietaryPlatforms,Software
Version	0.20.0
In Bioconductor since	BioC 2.12 (R-3.0) (5 years)
License	GPL-2
Depends
Imports	base64
LinkingTo
Suggests	RUnit,BiocGenerics,IlluminaDataTestFiles(>= 1.0.2),BiocStyle
SystemRequirements
Enhances
URL	https://github.com/HenrikBengtsson/illuminaio
BugReports	https://github.com/HenrikBengtsson/illuminaio/issues
Depends On Me	normalize450K,RnBeads,wateRmelon
Imports Me	beadarray,ChAMP,crlmm,methylumi,minfi
Suggests Me	limma
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	illuminaio_0.20.0.tar.gz
Windows Binary	illuminaio_0.20.0.zip(32- & 64-bit)
Mac OS X 10.11 (El Capitan)	illuminaio_0.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/illuminaio
Package Short Url	//www.andersvercelli.com/packages/illuminaio/
Package Downloads Report	Download Stats