BiocParallel
DOI:
10.18129 / B9.bioc.BiocParallel
这个包是3.9版本Bioconductor;的稳定,最新的发布版本,请参阅BiocParallel。
Bioconductor设施并行评估
Bioconductor版本:3.9
这个包提供修改版本和新颖的实现函数并行评估,根据使用Bioconductor对象。
作者:Bioconductor包维护者(cre),马丁·摩根(aut),瓦莱丽Obenchain (aut),米歇尔•朗(aut)瑞恩•汤普森(aut) Nitesh Turaga (aut)
维修工:Bioconductor包维护者<维护者bioconductor.org >
从内部引用(R,回车引用(“BiocParallel”)):
安装
安装这个包,开始R(版本“3.6”)并输入:
如果(!requireNamespace (“BiocManager”,悄悄地= TRUE)) install.packages (“BiocManager”) BiocManager::安装(“BiocParallel”)
R的旧版本,请参考适当的Bioconductor释放。
文档
查看文档的版本这个包安装在您的系统,开始R和输入:
browseVignettes (“BiocParallel”)
细节
| biocViews |
基础设施,软件 |
| 版本 |
1.18.1 |
| Bioconductor自 |
BioC 2.13 (r - 3.0)(6年) |
| 许可证 |
GPL-2 | GPL-3 |
| 取决于 |
方法 |
| 进口 |
属性,跑龙套,futile.logger平行,雪 |
| 链接 |
黑洞 |
| 建议 |
BiocGenerics、工具、foreach,BatchJobs,BBmisc,doParallel,Rmpi,GenomicRanges,RNAseqData.HNRNPC.bam.chr14,TxDb.Hsapiens.UCSC.hg19.knownGene,VariantAnnotation,Rsamtools,GenomicAlignments,ShortRead,codetools,RUnit,BiocStyle,knitr,batchtools,data.table |
| SystemRequirements |
c++ 11 |
| 增强了 |
|
| URL |
https://github.com/Bioconductor/BiocParallel |
| BugReports |
https://github.com/Bioconductor/BiocParallel/issues |
| 取决于我 |
培根,BEclear,红衣主教,ClassifyR,clusterSeq,consensusSeekeR,文案,cydar,德科,DelayedArray,DEXSeq,DMCHMM,doppelgangR,GenomicFiles,hiReadsProcessor,检查,事,工商管理硕士,metagene,metagene2,Oscope,先驱者,PCAN,pRoloc,rnaseqGene,Rqc,测序,ShortRead,SigCheck,STROMA4,SummarizedBenchmark,股东价值分析,xcms |
| 进口我 |
abseqR,AffiXcan,ALDEx2,amplican,亚瑟士,atSNP,强盗,后面;,bayNorm,BiocNeighbors,BioCor,BiocSingular,BioMM,BioNetStat,biotmle,bsseq,CAGEfightR,篮球选手,CAMTHC,cellbaseR,CellBench,CellMixS,ChIPexoQual,ChIPQC,chromswitch,chromVAR,CNVRanger,CoGAPS,consensusDE,contiBAIT,coseq,cpvSNP,CRISPRseek,CrispRVariants,csaw,dcGSA,DEComplexDisease,DelayedMatrixStats,服饰,derfinder,DEScan2,DESeq2,DEsingle,DiffBind,dmrseq,剂量,DRIMSeq,DropletUtils,easyRNASeq,EMDomics,erma,ERSSA,fgsea,FindMyFriends,flowcatchR,GDCRNATools,GenoGAM,GenomicAlignments,genotypeeval,gmapR,GSEABenchmarkeR,GUIDEseq,h5vc,HiCcompare,HTSeqGenie,HTSFilter,iasva,icetea,理想的,IHWpaper,ima,ImpulseDE2,InPAS,感兴趣,电离,首次公开募股,iva,JunctionSeq,KinSwingR,LineagePulse,loci2path,LowMACA,MACPET,MCbiclust,metabomxtr,MethylAid,methylGSA,methylInheritance,methyvim,MetNet,MIGSA,minfi,motifbreakR,MPRAnalyze,MSnbase,multiHiCcompare,NBAMSeq,NBSplice,OmicsLonDA,OVESEG,PAIRADISE,Pbase,PowerExplorer,婴儿车,PrecisionTrialDrawer,proFIA,profileplyr,QDNAseq,qpgraph,qsea,QuasR,Rcwl,重新计票,REMP,RJMCMCNucleosomes,Rsamtools,RUVcorr,嘘,scDD,scde,scMerge,SCnorm,司康饼,scoreInvHap,食物,scRecover,颈背,芝麻,sigFeature,singscore,SNPhood,soGGi,SpectralTAD,飞溅,SplicingGraphs,srnadiff,TarSeqQC,TFBSTools,TMixClust,trena,时尚的,TSRchitect,TVTB,TxRegInfra,variancePartition,VariantFiltering,VariantTools,zinbwave |
| 建议我 |
CAGEWorkflow,嵌合体,curatedMetagenomicData,HDF5Array,MethylAidData,netSmooth,omicsPrint,PureCN,RcisTarget,SeqArray,simpleSingleCell,systemPipeR,TENxBrainData,TENxPBMCData,TFutils,tofsims,universalmotif |
| 我的链接 |
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| 构建报告 |
|
包档案
遵循2021年欧洲杯比分预测
指示在R会话中使用这个包。
