MSstatsConvert

DOI:10.18129/B9.bioc.MSstatsConvert

Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format

Bioconductor version: Release (3.16)

MSstatsConvert provides tools for importing reports of Mass Spectrometry data processing tools into R format suitable for statistical analysis using the MSstats and MSstatsTMT packages.

Author: Mateusz Staniak [aut, cre], Meena Choi [aut], Ting Huang [aut], Olga Vitek [aut]

Maintainer: Mateusz Staniak

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("MSstatsConvert")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文件;n for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsConvert")

HTML	R Script	Working with MSstatsConvert
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport,MassSpectrometry,Proteomics,QualityControl,Software
Version	1.8.2
In Bioconductor since	BioC 3.12 (R-4.0) (2 years)
License	Artistic-2.0
Depends	R (>= 4.0)
Imports	data.table,log4r, methods,checkmate, utils,stringi
LinkingTo
Suggests	tinytest,covr,knitr,rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	MSstats,MSstatsLiP,MSstatsPTM,MSstatsShiny,MSstatsTMT
Suggests Me
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	MSstatsConvert_1.8.2.tar.gz
Windows Binary	MSstatsConvert_1.8.2.zip(64-bit only)
macOS Binary (x86_64)	MSstatsConvert_1.8.2.tgz
macOS Binary (arm64)	MSstatsConvert_1.8.2.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsConvert
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MSstatsConvert
Bioc Package Browser	https://code.bioconductor.org/browse/MSstatsConvert/
Package Short Url	//www.andersvercelli.com/packages/MSstatsConvert/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.16	Source Archive