生物比较

doi:10.18129/b9.bioc.biocparallel

这是发展BioCparallal的版本;对于稳定版本,请参阅生物比较

用于并联评估的生物导体设施

生物导体版本:开发(3.13)

该软件包提供了修改的版本和新的功能实现,用于并行评估,该功能量身定制,可用于生物导体对象。

作者:Bioconductor软件包维护者[CRE],Martin Morgan [AUT],Valerie Obenchain [AUT],Michel Lang [aut],Ryan Thompson [aut],Nitesh Turaga [aut],Aaron Lun [CTB]

维护者:bioconductor.org>的生物导体套件维护器<维护器>

引用(从r内,输入引用(“ BioCparalleal”)):

安装

要安装此软件包,请启动R(版本“ 4.1”)并输入:

if(!sireseenamespace(“ biocmanager”,悄悄= true))install.packages(“ biocmanager”)#以下初始化了Bioc devel Biocmanager :: install(decon ='devel')biocmanager :: install(biocparallecter(“ biocparallear”)的用法

对于R的较旧版本,请参考适当的生物导体释放

文档

要查看系统中安装此软件包的版本的文档,请启动R并输入:

Browsevignettes(“ BioCparalleal”)

PDF R脚本 1.生物比较简介
PDF R脚本 2. Batchtoolsparam简介
PDF R脚本 3.错误,日志和调试
PDF 参考手册
文本 消息

细节

生物浏览 基础设施,,,,软件
版本 1.25.2
在生物导体中 Bioc 2.13(R-3.0)(7。5年)
执照 GPL-2 |GPL-3
要看 方法
进口 统计,utils,徒劳, 平行,
链接 BH
建议 生物基因, 工具,foreach,,,,batchjobs,,,,bbmisc,,,,多帕尔,,,,rmpi,,,,基因组机,,,,rnaseqdata.hnrnpc.bam.chr14,,,,txdb.hsapiens.ucsc.hg19,,,,变体,,,,rsamtools,,,,基因组签名,,,,Shortread,,,,CodeTools,,,,运行,,,,生物使用,,,,尼特,,,,批处理,,,,Data.Table
系统要求 C ++ 11
增强
URL https://github.com/bioconductor/biocparallel
BugReports https://github.com/bioconductor/biocparallel/issues
取决于我 培根,,,,清楚,,,,红衣主教,,,,分类,,,,clusterSeq,,,,共识,,,,copywriter,,,,装饰,,,,Dewseq,,,,dexseq,,,,DMCFB,,,,dmchmm,,,,doppelgangr,,,,DSS,,,,弗雷泽,,,,Genomicfiles,,,,Hireadsprocessor,,,,检查,,,,事情,,,,mbased,,,,metagene,,,,metagene2,,,,NCGTW,,,,示波器,,,,校长,,,,PCAN,,,,周期性,,,,proloc,,,,RQC,,,,测序,,,,Shortread,,,,西格克,,,,光谱,,,,基质4,,,,总结,,,,SVA,,,,方差分区,,,,XCMS
进口我 Abseqr,,,,atimpute,,,,辅助,,,,ALDEX2,,,,字母,,,,阿尔卑斯山,,,,alpsnmr,,,,扩增器,,,,ASIC,,,,Aspediafi,,,,ATSNP,,,,小班夫,,,,土匪,,,,基本,,,,Batchelor,,,,Baynorm,,,,生物脑,,,,生物剂,,,,生物兴奋,,,,Biomm,,,,bionetstat,,,,Biotmle,,,,饼干,,,,Bluster,,,,布伦达布,,,,BSSEQ,,,,Cagefightr,,,,卡格,,,,蜂窝监测器,,,,蜂窝架,,,,细胞混蛋,,,,人口普查,,,,chipexoqual,,,,chipqc,,,,染色体,,,,Chromswitch,,,,Chromvar,,,,cnvranger,,,,COGAPS,,,,共识,,,,contibait,,,,coregx,,,,Coseq,,,,CPVSNP,,,,CRISPRSEEK,,,,crisprvariants,,,,CSAW,,,,Cydar,,,,达斯珀,,,,DCGSA,,,,Debcam,,,,分解疾病,,,,延迟的matrixstats,,,,德芬德,,,,DESCAN2,,,,deseq2,,,,desingle,,,,差异,,,,DMRSEQ,,,,剂量,,,,Drimseq,,,,液滴,,,,沙丘,,,,EasyRnaseq,,,,犹太人,,,,Erma,,,,ERSSA,,,,逃脱,,,,Exomepeak2,,,,fgsea,,,,Findmyfriends,,,,FlowCatchr,,,,Flowspecs,,,,gdcrnatools,,,,Genogam,,,,基因组签名,,,,Genotypeeval,,,,GMAPR,,,,Gscreend,,,,GSEABENCHMARKER,,,,GSVA,,,,Guideseq,,,,H5VC,,,,打ic,,,,Hiccompare,,,,htseqgenie,,,,htsfilter,,,,Iasva,,,,冰茶,,,,理想的,,,,ihwpaper,,,,IMAS,,,,inpas,,,,兴趣,,,,电离,,,,IPO,,,,Isanalytics,,,,IVAS,,,,Kinswingr,,,,谱系,,,,loci2path,,,,Lowmaca,,,,Macpet,,,,mbkmeans,,,,McBiclust,,,,化合物,,,,metaseqr2,,,,Methcp,,,,甲基化,,,,甲基,,,,甲基硫酸,,,,metnet,,,,Migsa,,,,Minfi,,,,mmappr2,,,,Mogamun,,,,Motifbreakr,,,,mpranalyze,,,,MSNBase,,,,msstatssamples,,,,多希克科姆,,,,mumosa,,,,马斯喀特,,,,nbamseq,,,,nbsplice,,,,NPARC,,,,Omicslonda,,,,ORFIK,,,,Oveseg,,,,配对,,,,PCATOOLS,,,,Pharmacogx,,,,管道,,,,婴儿车,,,,Precisiontrialldrawer,,,,proactiv,,,,profia,,,,profileplyr,,,,qpgraph,,,,QSEA,,,,,,,,Radiogx,,,,rcwl,,,,叙事,,,,雷根里奇,,,,REMP,,,,RJMCMCN核小体,,,,rnamodr,,,,rsamtools,,,,Ruvcorr,,,,评分,,,,ScClassify,,,,scdblfinder,,,,SCDD,,,,SCDE,,,,SCFA,,,,Schot,,,,Scmerge,,,,scnorm,,,,烤饼,,,,Scoreinvhap,,,,SCPCA,,,,斯克兰,,,,滚动,,,,颈背,,,,Scthi,,,,砍伐,,,,芝麻,,,,setools,,,,sigfeature,,,,SignaturesEarch,,,,Singlecelltk,,,,辛格,,,,唱歌,,,,Snphood,,,,soggi,,,,光谱,,,,spicyr,,,,飞溅,,,,剪接图,,,,Srnadiff,,,,TAPSEQ,,,,tarseqqc,,,,tbsignatureprofiler,,,,TFBSTOOLS,,,,tmixclust,,,,有毒,,,,TPP2D,,,,Tradeseq,,,,特雷娜,,,,时髦的,,,,tsrchitect,,,,TVTB,,,,变体滤波器,,,,变体工具,,,,Velociraptor,,,,waddr,,,,Weitrix,,,,Zinbwave
建议我 beachmat,,,,CageWorkFlow,,,,策划的元素元素,,,,延迟,,,,Dialignr,,,,Glmgampoi,,,,HDF5Array,,,,甲基辅助,,,,NetSmooth,,,,OMICSPRINT,,,,属属,,,,兰特罗,,,,rcistarget,,,,SCGPS,,,,Seqarray,,,,Systempiper,,,,tenxbraindata,,,,tenxpbmcdata,,,,tfutils,,,,TiledBarray,,,,TOFSIMS,,,,TSCAN,,,,Universalmotif
链接到我
构建报告

包装档案

跟随2021年欧洲杯比分预测 在R会话中使用此软件包的说明。

源包 biocparallel_1.25.2.2.tar.gz
Windows二进制 biocparallel_1.25.2.2.zip
MacOS 10.13(高山脉) biocparallel_1.25.2.tgz
源存储库 git克隆https://git.bioconductor.org/packages/biocparallel
源存储库(开发人员访问) git clone git@git.bioconductor.org:包装/biocparallel
包装短URL //www.andersvercelli.com/packages/biocparalle//
软件包下载报告 下载统计

文档»

生物导体

r/克兰软件包和文档

支持»

请阅读发布指南。向以下位置之一发布有关生物导体的问题:

  • 支持网站- 有关生物处理套件的问题
  • Bioc-devel邮件列表 - 包装开发人员2021欧洲杯体育投注开户