标签。版本2.20.0的更改------------------------------ o解决输出代码块的造型问题，由RmarkDown版本2.7.0的更改引入（https://github.com/Bioconductor/BiocStyle/issues/86) CHANGES IN VERSION 2.18.0 ------------------------ BUG FIXES o Fix issue使用`fig.small = true`块参数创建的图像未显示在html输出中（https://github.com/bioconductor/biocstyle/issues/83）。版本2.8.0的更改------------------------------重要的用户可见更改o将'相对_path'参数添加到'pdf_document'o添加参数'titlecaps'to'html_document'o已删除的置换函数错误修复了o修复了一个错误时，在生成导航链接时，该链接会导致一个空文档，当时没有款会合并2.6.0版本----------------------------------------------------------重大的用户可见更改o重命名'latex2'，'pdf_document2'和'html_document2'to'latex'，'pdf_document'和'html_document'和'html_document'，分别o重命名为'pdf_document“从'use.unsrturl'到'use_unsrturl'，以与rmarkDown命名方案o拆分图/表字幕“。”而不是“”。为了最大程度地减少数字上点数的机会等。/Bioconductor/BiocStyle/essument/35）o根据“图”/“ FIG.SMALL”设置（由Aaron Lun报告）o Robustify \ Texttt，例如通过启用回压并修复控制空间的替换o更新乳胶代码突出显示pandoc输出的宏（由文斯·凯里（Vince Carey）报道）o silence silence syence syence syence syerce sereence serece n par in latex（）''发出的源文件丢失了最终的eol o fiens eol o修复了损坏的代码。Knitr挂钩调整页宽度o o在r markdown文档中包括包装版本字段，即使它们缺少摘要（https://github.com/bioconductor/biocductor/biocstyle/issues/29）AdjustWidth'环境（https://github.com/bioconductor/biocstyle/issues/28）错误修复和改进html样式o html样式o正确显示上标文本o允许在'knitr :: kable :: kable'（https：//github.com/bioconductor/biocstyle/issues/30）o嵌套列表的正确填充，文档日期和多行标题的凹痕o修复匹配作者的函数中的错误（https://support.bipport.bioconductor.or.or.or.or.or.gg/p/98155/）o ggplotly的正确水平对齐图形（https://support.bioconductor.org/p/97609/）-------- NEW FEATURES o Vignette "Authoring R Markdown vignettes" o R Markdown templates for 'pdf_document2' and 'html_document2' o Standard way of specifying author affiliations o Support for short title in R Markdown PDF output o Argument 'relative.path' to 'latex2()' (https://support.bioconductor.org/p/90352/) SIGNIFICANT USER-VISIBLE CHANGES o Increase column width in order to accommodate 80 characters wide code chunks o Separate caption title from description with newline o Use canonical URL to link to CRAN packages (https://github.com/Bioconductor/BiocStyle/issues/24) o Consistently number equations on right hand side across different output formats o Numerous CSS tweaks BUG FIXES AND IMPROVEMENTS o Support for PDFs typeset with 9pt and 8pt font size o Proper formatting of 'longtable' captions o Fix to retain spaces in '\texttt' o Replace carets "\^{}" by "\textasciicircum" to fix incompatibility with LaTeX 'soul' package used for inline code highlighting o Patch to avoid overfull pages containing a float followed by a longtable CHANGES IN VERSION 2.2.0 ------------------------ NEW FEATURES o New Bioconductor HTML Style. See package vignettes for details. BUG FIXES AND IMPROVEMENTS to Bioconductor LaTeX Style 2 o Use `\path` for file names to allow long line breaks o Load 'nowidow' LaTeX package to prevent widows and orphans o Patch bug in 'titlesec' 2.10.1 (http://tex.stackexchange.com/q/299969/102422) o Pass option `multiple` to 'footmisc' for better handling of consecutive footnotes o Load 'marginfix' LaTeX package to prevent margin notes from overflowing the bottom margin o Fix the issue with color spilling out on margin notes (https://github.com/Bioconductor/BiocStyle/issues/5) o Use `fig.asp` to override figure height (https://github.com/Bioconductor/BiocStyle/issues/4) o Fix compatibility with the 'float' package, in particular the `[H]` placement specifier o Load 'marginfix' LaTeX package to prevent margin notes from overflowing the bottom margin o Enclose wide floats in `\blockmargin` and `\unblockmargin` to prevent footnotes from entering them o Move the footnote mark inside margin notes o Add vertical skip after margin phantoms of wide floats for better alignment of margin notes with paragraph text o Fix concatenation of `includes` reported in https://github.com/Bioconductor/BiocStyle/issues/8 o Stratify parnote mark definition depending on package version (https://github.com/Bioconductor/BiocStyle/issues/7) o Capitalize default opening words in `\comment`, `\warning` and `\fixme`, and mention the optional argument in the vignette CHANGES IN VERSION 2.0.0 ------------------------ o New Bioconductor LaTeX Style. See package vignettes for details. CHANGES IN VERSION 1.8.0 ------------------------ o R Markdown templates for Bioconductor HTML and PDF documents o Suggest 'rmarkdown' as the default engine for .Rmd documents o Simplified use with 'rmarkdown' - no need to include a separate code chunk calling 'BiocStyle::markdown' anymore o Functions facilitating the inclusion of document compilation date and package version in the .Rmd document header CHANGES IN VERSION 1.4.0 ------------------------ USER VISIBLE CHANGES o Support for markdown documents o Add \Githubpkg markup command CHANGES IN VERSION 1.2.0 ------------------------ USER VISIBLE CHANGES o Remove dependency on 'helvet' LaTeX package to allow for the same font both in Sweave and knitr o Improve package vignette by adding paragraphs about building vignettes and using bibliography o knitr chunk_opts error=FALSE by default, so failures during vignette processing are signaled to R CMD build and R CMD check o Name-mangle \comment mark-up to avoid conflicts with other LaTeX styles o Introduce \bioctitle to allow for full and short (header) titles o Add BiocStyle::latex option 'use.unsrturl=TRUE' to use the 'unsrturl' bibliography style by default BUG FIXES o Avoid use of 'titling' LaTeX package to circumvent the conflict w/ \footnote in \author CHANGES IN VERSION 1.0.0 ------------------------ USER VISIBLE CHANGES o Rename \Rpkg{} as \CRANpkg{} to reflect functionality BUG FIXES o Avoid option conflict with \usepackage{colors}