版本0.99.0 +的更改1.1.x +拆分转换量的更改为变换示例和转换版本 +添加的log_modulo_skewness作为多样性索引 +添加功能，以汇总优势分类信息 +添加的功能 +添加的功能，以添加了添加的巨大分类信息，以添加到Coldata +添加较大的分类信息通过患病率（子群byprevalenttaxa/subsetByraretaxa） +添加的maptaxonomy +添加估计的估计值 + bugfix：sakephyloseqfromtreesummarizedExperiment检查现在，对于compatible + bugfix：meLTASSAID iSPASE + bugfix y metrasse y metrasse y metrass，+ added subsampleCounts for Subsampling/Rarefying data + added getExperimentCrossCorrelation for calculatting cross-correlation between features + added calculateOverlap + getUniqueTaxa & getTopTaxa: added option for alphabetical order Changes in version 1.3.x + name change: testForExperimentCrossCorrelat离子到TestexperimentCrossCorlation + GetExperimentCrossCorlation：默认过滤，默认过滤，抑制警告 +错误的选项：分类法：如果在最高级别附近（分类单位称为不匹配）附近的分类单元（分类单元）（subsamplecounts insamPlecounts insamplecounts添加 + PRENPLASE + PRONPLACH），则会出错。calculateUniFrac to calculateUnifrac + added na.rm option to getTopTaxa function + bugfix: makeTreeSEFromPseq -- orientation of assay is taken into account + bugfix: getExperimentCrossCorrelation's "matrix"" mode works with features named equally + bugfix: getExperimentCrossCorrelation's calculates correlations correctly with features named equally+ getexperimentCrossCrosscrosation名称更改为GetExperimentCrossosociation + GetExperimentCrossosociation：用户自身支持，在模式下进行排序==表启用 + getExperimentCrossassociation：添加了保证金和配对选项和配对的选项，AlgorithM Reviraved +添加的AlgorithM Rever + Adfement *Aliases for *axalea功能 *离子 + *RDA功能利用素食主义者：DBRDA代替素食：RDA +通过删除不必要的成对比较 +添加了新的内部功能。CALCUTER_REFERY_DISTANCE.CALCULES_REFERCH_DISTANCE来计算距离到单个参考样品 +添加了单个参考样品 +添加了新的Skin Microbiome示例示例示例示例示例'PEERJ1303033045'PEERJ13075' +added splitOn and unsplitOn functions + CLR transformation: remove internal relative transformation + Replace 'abund_values' argument with 'assay_name' + getExpCrossCorr: added altExp option + added detection threshold option to getTopTaxa + makeSummarizedExperimentFromBiom is now makeTreeSummarizedExperimentFromBiom + Added mergeSE function + bugfix: loadFromBiom Changes在版本1.5.x +添加的hintikkaxodata +添加的样本元数据选项中getExperimentCrossosociation + estimateFaith：添加对多个行的支持 + calculatreda/cca：添加的变量参数和使用Altexp + getExpcrosscorr + getExpCrosscorr替换为altexp参数。当计算功能之间的相关性 + getexprosscorr：kendall的tau是默认方法时，样本应匹配