3.7.1版本的变化- - - - - - - - - - - - - - - - - - - - - - - -用户可见的变化o添加分数与人口的小数点位置的精度。看到方法的人口()”和“defaultPopulation ()”。o添加元数据标签和组注释自动操纵的分数。看到方法gscoresTag()”和“gscoresGroup ()”。o添加元数据与分数的网站总数。看到“nsites()方法”。版本变化3.6.0 - - - - - - - - - - - - - - - - - - - - - - - -用户可见的变化o添加引用元数据可以通过GScores对象和引用()的方法。版本3.5.0变化- - - - - - - - - - - - - - - - - - - - - - - -用户可见的变化o类定义和方法支持访问这个注释包已经从VariantFiltering包GenomicScores包。o失踪phastCons分数在版本< = 3.4编码为0,现在被编码为NAs。3.2.0版本的变化- - - - - - - - - - - - - - - - - - - - - - - - o的更新用户可见的变化VariantFiltering包分数()函数允许一个10倍更快地检索意味着phastCons分数在基因组的间隔。 CHANGES IN VERSION 3.1.0 ------------------------ USER VISIBLE CHANGES o Updated phastCons scores to the UCSC available data on March 2015 o Individual files storing phastCons scores per chromosome within the 'extdata' directory of the package are now stored and loaded using the saveRDS() and readRDS() functions instead of classical save() and load(). Corresponding filenames have now an '.rds' extension and the chromosome name is written now at the end of the filename, right before '.rds'. CHANGES IN VERSION 3.0.0 ------------------------ USER VISIBLE CHANGES o Updated phastCons scores to the UCSC available data on October 2014 o Instead loading in main memory the set of phastCons scores for the entire human genome, they are now stored separetely by chromosome and they are loaded and cached into main memory as different chromosomes get accessed to reduce the memory footprint at package loading time. Caching may be disabled, and thus memory footprint minimized, setting a new argument 'caching=FALSE' in the 'scores()' function, at the cost of slowing down multiple calls to the 'scores()' function. CHANGES IN VERSION 0.99.1 ------------------------- USER VISIBLE CHANGES o Submission of the first version to the Bioconductor project. (start date: 15 April, 2014)