# # - eval = FALSE --------------------------------------------------------------- # 如果(!requireNamespace(“BiocManager”,悄悄地= TRUE)) # install.packages (BiocManager) # BiocManager::安装(“SingleCellMultiModal ") ## ---- 包括= TRUE,结果=“隐藏”,消息= FALSE,警告= FALSE --------------- 库(MultiAssayExperiment)图书馆(SpatialExperiment)图书馆(SingleCellMultiModal ) ## ----------------------------------------------------------------------------- seqFISH(数据类型=“mouse_visual_cortex”模式=“*”,dry.run = TRUE,version = " 2.0.0 " ) ## ----------------------------------------------------------------------------- seqfish < - seqfish(数据类型=“mouse_visual_cortex”模式=“*”,dry.run = FALSE,seqfish version = " 2.0.0 ") ## ----------------------------------------------------------------------------- 实验(seqfish ) ## ----------------------------------------------------------------------------- rownames (seqfish ) ## ----------------------------------------------------------------------------- sampleMap (seqfish ) ## ----------------------------------------------------------------------------- upsetSamples (seqfish) # #----------------------------------------------------------------------------- scRNAseq seqfish[[” "]] ## ----------------------------------------------------------------------------- (试验(seqfish scRNAseq)) [1:4 ] ## ----------------------------------------------------------------------------- seqfish seqfish[[” "]] ## ----------------------------------------------------------------------------- (试验(seqfish,“seqFISH”))[1:4 ] ## ----------------------------------------------------------------------------- ( sd < spatialData (seqfish seqfish[[” "]])) ## ----------------------------------------------------------------------------- 头(sc < spatialCoords (seqfish seqfish[[” "]])) ## ----------------------------------------------------------------------------- seqfish spatialCoordsNames (seqfish[[” "]]) ## ----------------------------------------------------------------------------- seqFISH (数据类型=“mouse_visual_cortex”模式=“*”,dry.run = FALSE, version = " 1.0.0 " ) ## ---- 整洁= TRUE --------------------------------------------------------------- sessionInfo ()