MSstatsSampleSize

DOI:10.18129/B9.bioc.MSstatsSampleSize

high-dimensi优化设计的仿真工具onal MS-based proteomics experiment

Bioconductor version: Release (3.13)

The packages estimates the variance in the input protein abundance data and simulates data with predefined number of biological replicates based on the variance estimation. It reports the mean predictive accuracy of the classifier and mean protein importance over multiple iterations of the simulation.

Author: Ting Huang [aut, cre], Meena Choi [aut], Olga Vitek [aut]

Maintainer: Ting Huang

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("MSstatsSampleSize")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsSampleSize")

HTML	R Script	MSstatsSampleSize User Guide
PDF		Reference Manual

Details

biocViews	2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯
Version	1.6.0
In Bioconductor since	BioC 3.10 (R-3.6) (1.5 years)
License	Artistic-2.0
Depends	R (>= 3.6)
Imports	ggplot2,BiocParallel,caret,gridExtra,reshape2, stats, utils, grDevices, graphics,MSstats
LinkingTo
Suggests	BiocStyle,knitr,rmarkdown,testthat
SystemRequirements
Enhances
URL	http://msstats.org
BugReports	https://groups.google.com/forum/#!forum/msstats
Depends On Me
Imports Me
Suggests Me
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Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	MSstatsSampleSize_1.6.0.tar.gz
Windows Binary	MSstatsSampleSize_1.6.0.zip
macOS 10.13 (High Sierra)	MSstatsSampleSize_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsSampleSize
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MSstatsSampleSize
Package Short Url	//www.andersvercelli.com/packages/MSstatsSampleSize/
Package Downloads Report	Download Stats