S4Vectors.

DOI:10.18129 / b9.bioc.s4vectors.

矢量样和列表的基础和类似的Biocumond的容器

Biocometiond版本:释放(3.12)

S4Vectors包定义了向量和列表虚拟类和一组通用函数,它扩展普通向量的语义和R.包开发人员可以轻松地将载体或列表的对象视为矢量或列表的具体子类。2021欧洲杯体育投注开户此外,在S4Vectors包本身中实现了一般兴趣(例如DataFrame,RLE和HLE)的一些低级具体子类(例如,DataFrame,RLE和HLE)(在讽刺封装和其他Biocucondion Infrocketructure包中也实现了更多更多)。

作者:H.Pagès,M. Lawrence和P. Aboyoun

维护者:Bioconductor Package维护者

引文(从R内,输入引文(“S4Vectors”)):

安装

要安装此软件包,请启动R(版本“4.0”)并输入:

if(!percennamespace(“biocmanager”,squilly = true))install.packages(“biocmanager”)biocmanager ::安装(“s4vectors”)

对于旧版本,请参阅相应的生物导体释放

文件

要查看系统中安装此包版本的文档,请启动r并输入:

BROWSEVIGNETTES(“S4Vectors”)

PDF. r script. 快速概述S4类系统
PDF. r script. S4Vectors包的概述
PDF. r script. rle提示和技巧
PDF. 参考手册
文本 消息

细节

Biocviews. 2021年欧洲杯 2021年欧洲杯 2021年欧洲杯
版本 0.28.1.
在生物导体中以来 BIOC 3.0(R-3.1)(6.5岁)
执照 艺术-2.0
依靠 R(> = 4.0.0),方法,UTI,统计数据,stats4,生物根系(> = 0.36.0)
进口
链接到
建议 绞喉Genomicranges.概括分析矩阵delayedarray缩短图形data.table.运行生物焦
系统要求
加强
URL. https://biocumon.org/packages/s4vectors.
Bugreports. https://github.com/bioconductor/s4vectors/issues.
取决于我 altcdfenvs.annotationhubdata.Atacseqqc.Bambu.生物仪器Biseq.Brgenomics.bsgenome.Bumphunter.红衣主教CellMapper.Cexor.Chimeraviz浮雕Chippeakanno.chipseq.chipseqr.classifyr.法典COSEQ.CSAR.CSSQ.delayedarraydelayeddataframe.deseq2.Dexseq.DirichletMultinomial.DMCFB.DMCHMM.dmrcaller.Epigenomix.表演EQTL.实验室表达式FCCAC.flowsorted.blood.epic.Ga4ghclient.GenereGulation.genogam.genomeinfodb.基因管理基因组法Genomicranges.基因组织基因组Girafe.GROHMMGVIZ.Helloranges.inpas.兴趣绞喉索细motifdb.msnbase.Nadfinder.nbamseq.otubase.PADMA.pd.ag.pd.aragene.1.0.st.pd.aragene.1.1.st.st.pd.ath1.121501.PD.Barley1.pd.bovgene.1.0.st.st.pd.bovgene.1.1.st.st.st.Pd.bovine.pd.bsubtilis.pd.cangeene.1.0.st.st.pd.cangeene.1.1.st.st.Pd.Canine.pd.canine.2pd.celegans.pd.chicken.pd.chigene.1.0.stpd.chigene.1.1.st.st.pd.chogene.2.0.st.pd.chogene.2.1.stPd.Citrus.pd.clariom.d.human.pd.clariom.s.human.pd.clariom.s.human.ht.pd.clariom.s.mouse.pd.clariom.s.mouse.ht.pd.clariom.s.rat.pd.clariom.s.rat.ht.PD.COTTON.pd.cyngene.1.0.st.st.pd.cyngene.1.1.st.st.Pd.cygene.1.0.st.Pd.cygene.1.1.st.st.pd.cytogenetics.Array.pd.drogene.1.0.st.st.pd.drogene.1.1.st.st.pd.drosgenome1.pd.drosophila.2pd.e.coli.2.pd.ecoli.pd.ecoli.asv2.pd.elegene.1.0.stpd.elegene.1.1.st.st.st.pd.equgene.1.0.st.st.pd.equgeNe.1.1.st.st.pd.felgene.1.0.st.pd.felgene.1.1.st.st.st.Pd.fingene.1.0.st.st.pd.fingene.1.1.1.st.st.pd.genomewidesnp.5pd.genomewidesnp.6.pd.guigene.1.0.st.pd.guigene.1.1.st.st.pd.hc.g110pd.hg.focus.pd.hg.u133.plus.2pd.hg.u133a.pd.hg.u133a.2pd.hg.u133a.tag.pd.hg.u133b.pd.hg.u219.pd.hg.u95a.pd.hg.u95av2.pd.hg.u95b.pd.hg.u95c.pd.hg.u95d.pd.hg.u95e.pd.hg18.60mer.expr.pd.ht.hg.u133.plus.pm.pd.ht.hg.u133a.pd.ht.mg.430Apd.hta.2.0.pd.hu6800.pd.huex.1.0.st.v2.pd.hugene.1.0.st.v1pd.hugene.1.1.st.v1pd.hugene.2.0.st.pd.hugene.2.1.st.st.pd.maize.pd.mapping250k.nsp.nsp.pd.mapping250k.sty.pd.mapping50k.hind240pd.mapping50k.xba240pd.margene.1.0.st.st.pd.margene.1.1.st.st.Pd.Medgene.1.0.st.PD.Medgene.1.1.st.st.Pd.Medicago.pd.mg.u74a.pd.mg.u74av2.pd.mg.u74b.pd.mg.u74bv2.pd.mg.u74c.pd.mg.u74cv2.pd.mirna.1.0pd.mirna.2.0pd.mirna.3.0.pd.mirna.4.0.pd.moe430apd.moe430b.pd.moex.1.0.st.v1pd.mogene.1.0.st.v1pd.mogene.1.1.st.v1pd.mogene.2.0.st.pd.mogene.2.1.st.st.pd.mouse430.2pd.mouse430a.2pd.mta.1.0.pd.mu11ksuba.pd.mu11ksubb.pd.nugo.hs1a520180pd.nugo.mm1a520177pd.ovigene.1.0.st.st.pd.ovigene.1.1.st.st.st.pd.pae.g1a.pd.plasmodium.anopheles.pd.poplar.pd.portcine.pd.porgene.1.0.st.st.Pd.porgene.1.1.st.st.pd.rabgene.1.0.stpd.rabgene.1.1.st.st.pd.rae230a.pd.rae230b.pd.raex.1.0.st.v1.pd.ragene.1.0.st.v1pd.ragene.1.1.st.v1pd.ragene.2.0.st.pd.ragene.2.1.st.st.pd.rat230.2.pd.rcngene.1.0.st.st.pd.rcngene.1.1.st.st.st.pd.rg.u34a.pd.rg.u34b.pd.rg.u34c.pd.rhegene.1.0.st.st.pd.rhegene.1.1.st.st.PD.RESUSpd.rice.pd.rjpgene.1.0.st.st.pd.rjpgene.1.1.st.st.pd.rn.u34.pd.rta.1.0.pd.rusgene.1.0.st.st.pd.rusgene.1.1.st.st.pd.s.aureus.Pd.soybean.Pd.soygene.1.0.st.st.pd.soygene.1.1.st.st.pd.sugar.cane.pd.tomato.pd.u133.x3p.pd.vitis.vinifera.pd.kwheat.pd.x.laevis.2pd.x.tropicalis.pd.xenopus.laevis.pd.yest.2.pd.yg.s98pd.zebgene.1.0.st.st.pd.zebgene.1.1.st.st.st.pd.czebrafish.紫红色RCWL.regenrich.repviz.ramodr.rnbeads.scdatavizSemmentseq.SEQGATE.snplocs.hsapiens.dbsnp141.grch38.光谱sqldataframe.structstrings.摘要博马克TimeSeriesexperiment.Topdownr.树ummariedexperiment.扭转variantexperiment.Varianttools.vulcan.xtrasnplocs.hsapiens.dbsnp141.grch38.xvector.
进口我 适应admumute.倍感工具AggregateBiovar.aldex2.等位基因矛纪高寒阿尔普斯纳姆扩增人Anufinder.蚕豆annotationdbi.annotationforge.annotationhub.annotatr.arraytv.aspediafi.Aspli.Aucell.BadregionFinder.舞会礼服基本Basicstarrseq.batchelor.拜士斯佩斯Biocio.Biocneighbors.Bioconcotk.生物集生物贴眼生物墨呢Biovizbase.Biscuiteer.Biseq.比特查吹风丝BNBC.BPRMeth.Brainsaber.Branchpointer.断点bsgenome.BSSeq.海滩CageFightr.蛋糕卡斯珀催化剂cbioportaldata.ccfindr.Celaref.celda.cellarepertorium.celldex.CETF.cgdv17.Chetah.别致ChipanAlyser.Chipenrich.chipenrich.data.chipexoqual.chipqc.ChipSeeker.chipseqdbdata.chipseqspike.Chromscape.铬星座ChromSchitch.Chromvar.西塞罗Cindex.Circrnaprofilercitefuse.切尔弗Clumsid.丁浓缩CLUSTIFYR.cn.mops.CNVPanelizer.cnvranger.可可Cogaps.彗星COMPETOOLS.ComplexHeatMap.共识共识contCopyNumber.撰稿人coregx.CoverageView.Crispseek.Crisprvariants.CSAW.腹带腌制胶癌CutatedTCGADATA.Customprodb.Cydar.Cytomapper.DAMEFINDER.司布德布雷斯勒解码decomptumor2sig畸形degnorm.重新评估delayedmatrixstats德内捷德derfinderhelper.derfinderplotdescan2.德沃瑟困惑diffcyt.Diffhic.差异过度性dittoseq.dmrcate.DMRSEQ.辅修德里姆瑟克droplettestfiles.Dropletuls.easyrnaseq.EEGC.Eisar.埃尔默eNCODEXPLORER.enmix.enrichmentbrowser.enrichtf.Ensembldb.Ensemblvep.EPITXDB.Epivizr.Epivizrdata.epivizrestalone.erma.esatac.eventPointer.exoMepeak2.实验室ExploreModelmatrix.FASTQCLEANER.快速Filterffpe.findmyfriends.鱼池fitcons.ucsc.hg19.流量计弗雷泽funcisnp.Ga4ghshiny.GCAPC.GDSARRAY.GenBankr.Generegionscan.创世纪Genestructuretools.genetonic.基因组GenomeIntervals.基因管理GenomicDataComons.基因组夫妇基因组互动基因组唑.Genoset.GGBase.GGBIO.GGTools.光明GMAPR.GmovizGoPro.哥特gqtlbase.gqtlstats.Grmetrics.GSEABENCHMARMARR.GSVA.GUIDESEQ.GwascatH5VChcaexplorer.HDF5Array.Hicbricks.hiccompare.高度相似的rnaseq.希尔达Hipathia.HMDBQuery.hmp16sdata.hmp2data.htseqgenie.HumantranscriptomeCompendium.冰茶理想的iloreg.IMAS.拖累2.检查互动潮流器我懂了Iseeu.Isomirs.IVAS.凡隘泻iwtomics.JunctionSeq.Karyploter.烤肉串Leebamviews.李森林Lipidr.loci2path.萝拉宏伟Madseq.mafdb.1kgenomes.phase1.grch38.mafdb.1kgenomes.phase1.hs37d5.mafdb.1kgenomes.phase3.grch38.mafdb.1kgenomes.phase3.hs37d5.mafdb.exac.r1.0.grch38.mafdb.exac.r1.0.hs37d5.mafdb.exac.r1.0.nontcga.grch38.mafdb.exac.r1.0.nontcga.hs37d5.mafdb.gnomad.r2.1.grch38.mafdb.gnomad.r2.1.hs37d5.mafdb.gnomad.r3.0.grch38.mafdb.gnomadex.r2.1.grch38.mafdb.gnomadex.r2.1.hs37d5.mafdb.topmed.freeze5.hg19.mafdb.topmed.freeze5.hg38.mafh5.gnomad.r3.0.grch38.马蒂尼鸡尾酒桅杆MBKmeans.McSea.一顿饭Meshr.meskit.metabcombiner.MetagenomeFeatures.metagxpancreas.METASEQR2.METCIRCMethcp.MethiLheritsim.methreg.Methylcc.甲基术Methylkit.甲基皮脂methylseqdata.甲基氏弥撒Methyvim.mimager.Minfi.最小值米拉幻影MissMethyl.错码mmapp2.mmdiff2.modstrings.马赛克mosimMotifBreakr.motifmatchr.图案mousegastrulationdata.MPRA.MSA.Mscoreutils.msgbsr.msprep.MultiAsaySayexperiment.多atAdataset.马斯喀特Musicatk.mutationalpatterns.mygene.myvariant.nanomethvizringerpeaks.ncrnatools.邻近netdx.诺斯Nucleosim.核核酸oligoclasses.ontoproc.OpenProper.orfik.有机族Organismdbi.探险者Packfinder.锥形Panelcn.mops.过去的pathwaysplice.PCAExplorer.pd.atdschip.tiling.pdinfobuilder.季节性ddna.PGA.Pharmacogx.Phastcons100way.ucsc.hg19.phastcons100way.ucsc.hg38Phastcons7way.ucsc.hg38PHEMDppipecomp.普利兰语PMP.波音聚酯纤维pqsfinder.摇篮预先预先进程PrecisionTrialDrawer.妊娠期Proactiv.撤销博士profflewlactiple.Pulsedsilac.purPwmenrich.qcmetrics.qfeatures.QPGraph..Quasr.R3CPET.r453plus1toolbox.radiogx.raggedexperiment.Rarevariantvis.rrcade.RCA.叙事追叙3.彻底甲基化补偿RegionReport.regsplice.Regutools.重新repitools.Residualmatrix.休息rexposome.rfarm.RGMQL.RHDF5CLIEL.riboprofiling肋骨RibosomeProfiling QCrjmcmcncnucosomes.rmassbank.rmmuant.rnaeditr.rnamodr.allanilineseq.rnamodr.ml.rnamodr.Ribomethseq.rnaprobr.怒吼rqc.RSAMTOOLS.rscudo.rtcgatoolbox.rtn.rtracklayer.SC3撒尿Scclassify.scdblfinder.SCDD.SCDS.Schot.SCMAP.骗子斯通范围SCP.SCPIPE.scrnapeq.颈背SCTERSOR.SCTGIF.scSEQARRAY.SEQCAT.seqplots.seqsetvis.SEQSQCSEQVARTOOLS.芝麻setools.七架子塞塞伦SGSEQ.缩短SinglecellexPeriment.singlecell multimodal.singlecelltk.单歌者斯嘉西尔Skewr.斯文snplocs.hsapiens.dbsnp.20101109snplocs.hsapiens.dbsnp141.grch38.snplocs.hsapiens.dbsnp144.grch37.snplocs.hsapiens.dbsnp144.grch38.snplocs.hsapiens.dbsnp149.grch38.snplocs.hsapiens.dbsnp150.grch38.snplocs.hsapiens.dbsnp151.grch38.Soggi.SomaticCencealterationsSomaticsignatures.西班牙猎犬Spatiamesxperiment.spatiallibd.Spicyr.泼溅拼接照片碎片沙拉群岛Srnadiff.斯坦Strandcheckr.塑造概括分析synextend.Tapseq.tarseqqc.TBSignatureProfiler.tcgabiolinks.tcgautils.TFBStools.TFHAZ.TidysinglecellexPeriment.TidySummarizedexperiment.Tiledbarray.TNT.毒素TrackViewer.TRADESEQ.经纪人rissview.时髦的TRNA.trnadbimport.Trnascanimport.TSCan.TSCR.TsrchitectTVTB.twoddpcr.tximeta.txreginfra.ularcirc.umi4cats.uposencymotif香草VariantAnnotation.变型滤波器漩涡vcfarray.Velociraptor.vplotr.波兰人Weitrix.Wiggleplotr.XCIR.XCMS.xtrasnplocs.hsapiens.dbsnp141.grch38.xtrasnplocs.hsapiens.dbsnp144.grch37.xtrasnplocs.hsapiens.dbsnp144.grch38.xvector.山姆斯Zellkonverter.
建议我 alleteringplicingevents.hg19.alleteringplicingevents.hg38生物根系施用adipochip.腌覆盆子亲爱的Epivizrchart.GlobalSeq.Gwastools.格纳RTCGA.StrafturalVariantAnnotation.tfea.chip.tfutils.Tidybulk.
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建立报告

包档案包

跟随2021年欧洲杯比分预测 在r会话中使用此包的说明。

源包 s4vectors_0.28.1.tar.gz.
Windows二进制文件 s4vectors_0.28.1.zip.
Macos 10.13(高塞拉) s4vectors_0.28.1.tgz.
源存储库 git clone https://git.biocumon.org/packages/s4vectors.
源存储库(开发人员访问) git clone git@git.biocondion.org:包/ s4vectors
包短网址 https://biocumon.org/packages/s4vectors/
包裹下载报告 下载统计信息
BIOC 3.12的旧源包 源档案

文件»

生物体

R./cr包裹和文件

支持»

请阅读张贴指南。将关于Biocometiond的问题发布到以下位置之一:

  • 支持网站- 关于生物导体包的问题
  • Bioc-devel.邮件列表 - 适用于包开发人员2021欧洲杯体育投注开户