runibic

DOI:10.18129/B9.bioc.runibic

runibic: row-based biclustering algorithm for analysis of gene expression data in R

Bioconductor版本:版本(3.15)

This package implements UbiBic algorithm in R. This biclustering algorithm for analysis of gene expression data was introduced by Zhenjia Wang et al. in 2016. It is currently considered the most promising biclustering method for identification of meaningful structures in complex and noisy data.

Author: Patryk Orzechowski, Artur Pańszczyk

Maintainer: Patryk Orzechowski

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("runibic")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看documentation for the version of this package installed in your system, start R and enter:

browseVignettes("runibic")

HTML		runibic: UniBic in R Tutorial
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯
Version	1.18.0
In Bioconductor since	BioC 3.6 (R-3.4) (4.5 years)
License	MIT + fileLICENSE
Depends	R (>= 3.4.0),biclust,SummarizedExperiment
Imports	Rcpp(>= 0.12.12),testthat, methods
LinkingTo	Rcpp
Suggests	knitr,rmarkdown,GEOquery,affy,airway,QUBIC
SystemRequirements	C++11, GNU make
Enhances
URL	http://github.com/athril/runibic
BugReports	http://github.com/athril/runibic/issues
Depends On Me
Imports Me
Suggests Me	mosbi
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	runibic_1.18.0.tar.gz
Windows Binary	runibic_1.18.0.zip
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/runibic
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/runibic
Package Short Url	//www.andersvercelli.com/packages/runibic/
Package Downloads Report	Download Stats