switchde

DOI:10.18129/B9.bioc.switchde

Switch-like differential expression across single-cell trajectories

Bioconductor version: Release (3.13)

Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.

Author: Kieran Campbell [aut, cre]

Maintainer: Kieran Campbell

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("switchde")

For older versions of R, please refer to the appropriateBioconductor release.

Documentation

查看文档的版本包age installed in your system, start R and enter:

browseVignettes("switchde")

HTML	R Script	An overview of the switchde package
PDF		Reference Manual
Text		NEWS

Details

biocViews	2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯 ,2021年欧洲杯
Version	1.18.0
In Bioconductor since	BioC 3.4 (R-3.3) (4.5 years)
License	GPL (>= 2)
Depends	R (>= 3.4),SingleCellExperiment
Imports	SummarizedExperiment,dplyr,ggplot2, methods, stats
LinkingTo
Suggests	knitr,rmarkdown,BiocStyle,testthat,numDeriv,tidyr
SystemRequirements
Enhances
URL	https://github.com/kieranrcampbell/switchde
BugReports	https://github.com/kieranrcampbell/switchde
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow2021年欧洲杯比分预测 instructions to use this package in your R session.

Source Package	switchde_1.18.0.tar.gz
Windows Binary	switchde_1.18.0.zip
macOS 10.13 (High Sierra)	switchde_1.18.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/switchde
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/switchde
Package Short Url	//www.andersvercelli.com/packages/switchde/
Package Downloads Report	Download Stats