＃更改对该项目的日志著名更改将记录在此文件中。## [1.2.02] - 2018-04-10-错误修复：当给出与样品的甲基化数据没有重叠的区域集时，聚集的甲基现在不应破裂。发出警告，以说明该区域集的名称。## [0.99.92] - 2017-10-22-Mirascore（）包装器功能不再导出-BSreadBiseq不再添加“ Samplename”列## [0.99.91] - 2017-10-17- scecoredip（）function name changed to calcMIRAScore() - output coverage column from aggregateMethyl(): name changed to sumCoverage for clarity - minReads parameter name (parameter for aggregateMethyl) was changed to minBaseCovPerBin for clarity - sampleName column no longer recommended in input for aggregateMethyl, also aggregateMethyl不再返回采样列。这节省了很多内存。## [0.99.7] - 2017-08-21-删除了Scoredip（）的Bincount参数。现在，ScoreIp只是从输入值的长度中获取此功能。在函数调用中包含“ bincount”参数现在将导致错误。 - Major change: changed user interface of scoreDip() so that input is now a data.table of binned methylation values rather than a vector of binned methylation values. The function can now be called without using data.table syntax (e.g. the old sytax: binnedDT[, scoreDip(methylProp), by= .(sampleName, featureID). As a result of this change the name of the first parameter has been changed from "values" to "binnedDT". If existing code has the "values" parameter, an error will result. Code may need to be modified to reflect syntax change although the old syntax still works for now (but is not the preferred syntax and support for that syntax may be deprecated in the future).0 - Made "coverage" column optional for the input methylation data ("aggregateMethyl" function) - Made "methylCount" column optional for the input methylation data (to "aggregateMethyl" function)