版本2.3.0的更改------------------------------新功能o o重新分配了自举方法,以改善内存使用情况并减少计算时间。o添加了一个plot_metagene函数,以从data.frame中产生metagene图。以避免始终依靠metagene对象。o弃用范围和bin_size参数。o在小插图中添加了新部分:“管理大数据集”和“将配置文件与排列进行比较”。错误修复o删除了不再与GGPLOT2> 2.2.0一起使用的参数。o更改了Seqlevels检查以匹配基因组学的变化。o添加了一次检查以尽早停止并输出明确错误消息,当时Granges中的位置大于染色体的大小。版本2.2.0的更改----------------------------- o添加了检查,以避免在第一次之后参数时产生相同的矩阵或数据框架功能调用。o将分析分为多个(选项)中间步骤(add_design,product_matrices和produce_data_frame)。 o narrowPeak and broadPeak format is now supported. o Added multiple getter to access metagene members that are all now private (get_params, get_design, get_regions, get_matrices, get_data_frame, get_plot, get_raw_coverages and get_normalized_coverages. o Added the NCIS algorithm for noise removal. o Replaced the old datasets with promoters_hg19, promoters_hg18, promoters_mm10 and promoters_mm9 that can be accessed with data(promoters_????). o Added flip_regions and unflip_regions to switch regions orientation based on the strand.