## ----style, echo = FALSE，结果= ' asis '------------------------------------ BiocStyle:减价 () ## ---- 包括= FALSE --------------------------------------------------------- ## 情况下(刚果民主共和国的例子)库(GRmetrics ) ## ----------------------------------------------------------------------------- 数据(inputCaseA ) ## ---- 包括= FALSE --------------------------------------------------------- inputCaseA = as.data.frame (inputCaseA ) ## -----------------------------------------------------------------------------头(inputCaseA ) ## ---- 包括= FALSE --------------------------------------------------------- drc_output = GRfit (inputCaseA,groupingVariables = c(“cell_line”、“代理 ')) ## ----------------------------------------------------------------------------- drc_output ## ----------------------------------------------------------------------------- 头(GRgetMetrics (drc_output )) ## ----------------------------------------------------------------------------- 头(GRgetValues (drc_output )) ## ----------------------------------------------------------------------------- GRgetGroupVars (drc_output) # #----------------------------------------------------------------------------- # 画剂量反应曲线GRdrawDRC (drc_output) GRdrawDRC (drc_output实验= c(“BT20 drugA’,‘MCF10A drugA’,‘MCF7 drugA ')) GRdrawDRC (drc_output实验= c(“BT20 drugA’,‘MCF10A drugA’,‘MCF7 drugA”),最小值= 10 ^ (4),max = 10 ^ 2) GRdrawDRC (drc_output,情节= FALSE ) ## ----------------------------------------------------------------------------- ## 案例C数据(inputCaseC(散点图和箱线图的例子) ) ## ---- 包括= FALSE --------------------------------------------------------- inputCaseC = as.data.frame (inputCaseC ) ## ----------------------------------------------------------------------------- 头(inputCaseC ) ## ---- 包括= FALSE --------------------------------------------------------- inputData = inputCaseC output1 = GRfit (groupingVariables = c(“cell_line”、“代理”,“微扰”,“复制”,“时间”),c =” ") ## ----------------------------------------------------------------------------- # 画散点图GRscatter (output1‘GR50’,‘代理’,c(“drugA”、“drugD”)、“drugB”)GRscatter (output1,‘GR50’,‘代理’,c(“drugA”、“drugD”)、“drugB”,情节= FALSE) #画箱线图GRbox (output1指标= GRinf, groupVariable = cell_line, pointColor =“代理人”)GRbox (output1指标= GRinf, groupVariable =“cell_line”,pointColor =' agent'， factors = c('BT20'， 'MCF10A')) GRbox(output1, metric ='GRinf'， groupVariable =' cell_line'， pointColor =' agent'， factors = c('BT20'， 'MCF10A')， plotly = FALSE) GRbox(output1, metric ='GR50'， groupVariable =' cell_line'， pointColor =' agent'， wilA =' BT20'， wilB = c('MCF7'， 'MCF10A')， plotly = FALSE)